RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 TMEM59LQ9UK28 342 aa7.16□□□□□ -1.26
AP3S1-202ENST00000395548 C5orf42Q9H799 3197 aa7.15□□□□□ -1.26
AP3S1-202ENST00000395548 CDH23Q9H251 3354 aa7.15□□□□□ -1.26
AP3S1-202ENST00000395548 GREM1O60565 184 aa7.15□□□□□ -1.26
AP3S1-202ENST00000395548 BBOX1O75936 387 aa7.15□□□□□ -1.26
AP3S1-202ENST00000395548 ITGB8P26012 769 aa7.15□□□□□ -1.26
AP3S1-202ENST00000395548 PRKG1Q13976 671 aa7.15□□□□□ -1.26
AP3S1-202ENST00000395548 SP8Q8IXZ3 490 aa7.15□□□□□ -1.26
AP3S1-202ENST00000395548 AGBL3Q8NEM8 1001 aa7.15□□□□□ -1.26
AP3S1-202ENST00000395548 LIN37Q96GY3 246 aaPredicted RBP7.15□□□□□ -1.26
AP3S1-202ENST00000395548 DEFB118Q96PH6 123 aa7.15□□□□□ -1.26
AP3S1-202ENST00000395548 KIF2CQ99661 725 aa7.15□□□□□ -1.26
AP3S1-202ENST00000395548 TTYH1Q9H313 450 aaPredicted RBP7.15□□□□□ -1.26
AP3S1-202ENST00000395548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.15□□□□□ -1.26
AP3S1-202ENST00000395548 SSC5DA1L4H1 1573 aa7.15□□□□□ -1.27
AP3S1-202ENST00000395548 CACNA1BQ00975 2339 aa7.15□□□□□ -1.27
AP3S1-202ENST00000395548 DNAJC25-GNG10A0A024R161 153 aa7.14□□□□□ -1.27
AP3S1-202ENST00000395548 WASH4PA8MWX3 477 aa7.14□□□□□ -1.27
AP3S1-202ENST00000395548 TLR2O60603 784 aa7.14□□□□□ -1.27
AP3S1-202ENST00000395548 VIL1P09327 827 aaKnown RBP7.14□□□□□ -1.27
AP3S1-202ENST00000395548 TNNT2P45379 298 aaPredicted RBP7.14□□□□□ -1.27
AP3S1-202ENST00000395548 AKNAD1Q5T1N1 836 aa7.14□□□□□ -1.27
AP3S1-202ENST00000395548 BHLHE22Q8NFJ8 381 aaPredicted RBP7.14□□□□□ -1.27
AP3S1-202ENST00000395548 ABHD4Q8TB40 342 aa7.14□□□□□ -1.27
AP3S1-202ENST00000395548 SREK1Q8WXA9 508 aaKnown RBP7.14□□□□□ -1.27
AP3S1-202ENST00000395548 PTPN18Q99952 460 aa7.14□□□□□ -1.27
AP3S1-202ENST00000395548 ARHGAP39Q9C0H5 1083 aa7.14□□□□□ -1.27
AP3S1-202ENST00000395548 ASCC2Q9H1I8 757 aaPredicted RBP7.14□□□□□ -1.27
AP3S1-202ENST00000395548 BRMS1Q9HCU9 246 aa7.14□□□□□ -1.27
AP3S1-202ENST00000395548 MYOZ2Q9NPC6 264 aa7.14□□□□□ -1.27
AP3S1-202ENST00000395548 PCDHB14Q9Y5E9 798 aa7.14□□□□□ -1.27
AP3S1-202ENST00000395548 ZDBF2Q9HCK1 2354 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 MYPNQ86TC9 1320 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 SLC22A31A6NKX4 558 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 RGS13O14921 159 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 SMARCA5O60264 1052 aaPredicted RBP7.13□□□□□ -1.27
AP3S1-202ENST00000395548 LRRN2O75325 713 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 KRT37O76014 449 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 ATE1O95260 518 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 RAG1P15918 1043 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 TCF3P15923 654 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 PSMC4P43686 418 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 HK2P52789 917 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 EGR3Q06889 387 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 MESP2Q0VG99 397 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 CLEC16AQ2KHT3 1053 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 RALGPS1Q5JS13 557 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 DHX38Q92620 1227 aaKnown RBP7.13□□□□□ -1.27
AP3S1-202ENST00000395548 ADAMTS10Q9H324 1103 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 DBNDD1Q9H9R9 158 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 GMIPQ9P107 970 aa7.13□□□□□ -1.27
AP3S1-202ENST00000395548 ADGRA2Q96PE1 1338 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.12□□□□□ -1.27
AP3S1-202ENST00000395548 RBAK-RBAKDNI3L0D1 243 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 ECE2O60344 883 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 DNAJA2O60884 412 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 A1BGP04217 495 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 ZNF16P17020 682 aaPredicted RBP7.12□□□□□ -1.27
AP3S1-202ENST00000395548 RNF4P78317 190 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 JAG1P78504 1218 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 ARSHQ5FYA8 562 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 PPM1EQ8WY54 764 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 SPATA32Q96LK8 384 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.12□□□□□ -1.27
AP3S1-202ENST00000395548 C11orf49Q9H6J7 331 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 ZCCHC17Q9NP64 241 aaKnown RBP7.12□□□□□ -1.27
AP3S1-202ENST00000395548 WDFY4Q6ZS81 3184 aa7.12□□□□□ -1.27
AP3S1-202ENST00000395548 ROCK2O75116 1388 aaKnown RBP7.11□□□□□ -1.27
AP3S1-202ENST00000395548 HEG1Q9ULI3 1381 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 FAM86C2PA6NEL3 165 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 DBX1A6NMT0 343 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 HPXP02790 462 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 NCLP19338 710 aaKnown RBP7.11□□□□□ -1.27
AP3S1-202ENST00000395548 GTF2A2P52657 109 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 RAD51AP2Q09MP3 1159 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 EIF4A2Q14240 407 aaKnown RBP7.11□□□□□ -1.27
AP3S1-202ENST00000395548 KCTD2Q14681 263 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 ZNF124Q15973 351 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 APOBEC3FQ8IUX4 373 aaKnown RBP7.11□□□□□ -1.27
AP3S1-202ENST00000395548 REXO1Q8N1G1 1221 aaKnown RBP7.11□□□□□ -1.27
AP3S1-202ENST00000395548 OXR1Q8N573 874 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 TMEM87AQ8NBN3 555 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 ENOX1Q8TC92 643 aaKnown RBP7.11□□□□□ -1.27
AP3S1-202ENST00000395548 DIS3LQ8TF46 1054 aaKnown RBP7.11□□□□□ -1.27
AP3S1-202ENST00000395548 PPP1R16BQ96T49 567 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 EYA3Q99504 573 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 EHMT1Q9H9B1 1298 aa7.11□□□□□ -1.27
AP3S1-202ENST00000395548 RTL9Q8NET4 1388 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 ABCC12Q96J65 1359 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 MCM4P33991 863 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 ZNF165P49910 485 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 APOBRQ0VD83 1088 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 SEZ6Q53EL9 994 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 CDCP2Q5VXM1 449 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 PRR23BQ6ZRT6 265 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 PDZD8Q8NEN9 1154 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 VWCEQ96DN2 955 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 CLMNQ96JQ2 1002 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 UIMC1Q96RL1 719 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 ADAMTS1Q9UHI8 967 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms