RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 A0A1B0GTH6 734 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 TSPY2A6NKD2 308 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 TSPY3P0CV98 308 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 TSPY8P0CW00 308 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 CDC25AP30304 524 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 HSPA9P38646 679 aaKnown RBP8.24□□□□□ -1.09
VTI1A-201ENST00000393077 EIF2B2P49770 351 aaKnown RBP8.24□□□□□ -1.09
VTI1A-201ENST00000393077 GALK1P51570 392 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 TIMM10P62072 90 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 TSPY1Q01534 308 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 ARID5AQ03989 594 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 ITGB3BPQ13352 177 aaPredicted RBP8.24□□□□□ -1.09
VTI1A-201ENST00000393077 MED21Q13503 144 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 GCKRQ14397 625 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 PAPD7Q5XG87 772 aaKnown RBP8.24□□□□□ -1.09
VTI1A-201ENST00000393077 PATL1Q86TB9 770 aaKnown RBP8.24□□□□□ -1.09
VTI1A-201ENST00000393077 DDHD1Q8NEL9 900 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 GDAP1Q8TB36 358 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 DHRS1Q96LJ7 313 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 IL1RAPL1Q9NZN1 696 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 LRP2BPQ9P2M1 347 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 ZNF652Q9Y2D9 606 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 NDUFB9Q9Y6M9 179 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 PTCH1Q13635 1447 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 MYO3AQ8NEV4 1616 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 TCP11X1B4DZS4 312 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 PPIP5K2O43314 1243 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 RAD21O60216 631 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 APOEP02649 317 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 CCNFP41002 786 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 PMS2P54278 862 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 IRX4P78413 519 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 CDR2Q01850 454 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 BYSLQ13895 437 aaKnown RBP8.24□□□□□ -1.09
VTI1A-201ENST00000393077 CCDC153Q494R4 210 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 SNX30Q5VWJ9 437 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 LRRC43Q8N309 656 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 CCDC82Q8N4S0 544 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 PIP4K2CQ8TBX8 421 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 ZNF594Q96JF6 807 aaPredicted RBP8.24□□□□□ -1.09
VTI1A-201ENST00000393077 CORO1BQ9BR76 489 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 PITPNM3Q9BZ71 974 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 ABCF3Q9NUQ8 709 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 SMARCAL1Q9NZC9 954 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 PPLO60437 1756 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 DLC1Q96QB1 1528 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 PENKP01210 267 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 KRT16P08779 473 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 PYGMP11217 842 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 PTDSS1P48651 473 aaKnown RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 TOB2Q14106 344 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 LRRC14Q15048 493 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 FAM98CQ17RN3 349 aaKnown RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 SGSM1Q2NKQ1 1148 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 C6orf89Q6UWU4 347 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 VPS36Q86VN1 386 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 CCNJLQ8IV13 435 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 KSR1Q8IVT5 923 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 NEK9Q8TD19 979 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 L3MBTL3Q96JM7 780 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 TTC1Q99614 292 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 MTA3Q9BTC8 594 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 FAM129AQ9BZQ8 928 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 NDST4Q9H3R1 872 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 NHEJ1Q9H9Q4 299 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 FGFR1OP2Q9NVK5 253 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 ZBTB21Q9ULJ3 1066 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 TRAF3IP3Q9Y228 551 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 SPATA31A3Q5VYP0 1347 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 CAPN9O14815 690 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 GYG2O15488 501 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 CYP27B1O15528 508 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 ASAP2O43150 1006 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 COBLO75128 1261 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 METAP2P50579 478 aaKnown RBP eCLIP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 BPIFB4P59827 614 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 PSMC1P62191 440 aaKnown RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 TBX2Q13207 712 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 MORC3Q14149 939 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 C6orf118Q5T5N4 469 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 TMEM53Q6P2H8 277 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 TMEM139Q8IV31 216 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 PLBD2Q8NHP8 589 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 PLVAPQ9BX97 442 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 IL25Q9H293 177 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 SYNCQ9H7C4 482 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 RBM12Q9NTZ6 932 aaKnown RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 ASAP1Q9ULH1 1129 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 A8MUI8 341 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 TBCAO75347 108 aaKnown RBP8.23□□□□□ -1.09
VTI1A-201ENST00000393077 DCTN3O75935 186 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 BCRP11274 1271 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 ABL2P42684 1182 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 PHEXP78562 749 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 CALCOCO2Q13137 446 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 MICU3Q86XE3 530 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 FERMT2Q96AC1 680 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 FMO2Q99518 471 aa8.23□□□□□ -1.09
VTI1A-201ENST00000393077 DDX50Q9BQ39 737 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms