RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PTPRAP18433 802 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 UBA7P41226 1012 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 SEPHS1P49903 392 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 NNTQ13423 1086 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 SPARCL1Q14515 664 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 RRAGBQ5VZM2 374 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 SLC30A6Q6NXT4 461 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 NAT16Q8N8M0 369 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 SPC24Q8NBT2 197 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 BAG1Q99933 345 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 TRIM39Q9HCM9 518 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 SH2B1Q9NRF2 756 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 GJB4Q9NTQ9 266 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 GRHPRQ9UBQ7 328 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 PCDHGA8Q9Y5G5 932 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 SOS1Q07889 1333 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 LILRA1O75019 489 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 RTN3O95197 1032 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 NPTXRO95502 500 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ZSCAN22P10073 491 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 HARSP12081 509 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 CPA1P15085 419 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 HTR1BP28222 390 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 HOXD12P35452 270 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 PIK3CBP42338 1070 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 LMAN1P49257 510 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 EIF5P55010 431 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 RNASELQ05823 741 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 NR5A1Q13285 461 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 PLCL1Q15111 1095 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 CNN3Q15417 329 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 PRR16Q569H4 304 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 CT83Q5H943 113 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 GPR139Q6DWJ6 353 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ELMSAN1Q6PJG2 1045 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 APOA5Q6Q788 366 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 CMTR2Q8IYT2 770 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 ANKRD20A12PQ8NF67 263 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 DIS3LQ8TF46 1054 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 TAAR9Q96RI9 348 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 MAK16Q9BXY0 300 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 ZCCHC2Q9C0B9 1178 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 WDR12Q9GZL7 423 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 STARD7Q9NQZ5 370 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ZNF69Q9UC07 566 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 SALL4Q9UJQ4 1053 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 CAMK2AQ9UQM7 478 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 A0A087WV62 115 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 LCHNA4D1U4 455 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 FAM205CA6NFA0 338 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 SLC22A31A6NKX4 558 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 RASA4BC9J798 803 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 TAF4O00268 1085 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 RASA4O43374 803 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 MAFKO60675 156 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ADH1CP00326 375 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 HSPA4P34932 840 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 DRG2P55039 364 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 MRPL28Q13084 256 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 LILRA6Q6PI73 481 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 KLRG1Q96E93 195 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 MVB12AQ96EY5 273 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 CCDC43Q96MW1 224 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 C1QTNF2Q9BXJ5 285 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 SEZ6LQ9BYH1 1024 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ZNF576Q9H609 170 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 KIF17Q9P2E2 1029 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 PCDHA2Q9Y5H9 948 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 NR2E3Q9Y5X4 410 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 C11orf95C9JLR9 678 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 STMN1P16949 149 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ATXN1P54253 815 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 USP14P54578 494 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 APBA1Q02410 837 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ZNF252P-AS1Q0IIN9 211 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 INPP5AQ14642 412 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 CRY1Q16526 586 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 XKR5Q6UX68 686 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 NPNTQ6UXI9 565 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 CCDC84Q86UT8 332 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 TTC30AQ86WT1 665 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 KSR1Q8IVT5 923 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 BSNDQ8WZ55 320 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ZNF669Q96BR6 464 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 STK31Q9BXU1 1019 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 MTFR1LQ9H019 292 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ZFAND3Q9H8U3 227 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ARHGAP28Q9P2N2 729 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 GOLGB1Q14789 3259 aaKnown RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 WIZO95785 1651 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 A0A0G2JS52 829 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 MYO1BO43795 1136 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 PRPF6O94906 941 aaKnown RBP3.98□□□□□ -1.77
XRN1-202ENST00000392981 CCDC175P0C221 793 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 THEGLP0DJG4 465 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 TNNT1P13805 278 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 KCNA2P16389 499 aa3.98□□□□□ -1.77
XRN1-202ENST00000392981 AKT1P31749 480 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms