RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 KIF11P52732 1056 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 PPP2R5EQ16537 467 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 RSBN1LQ6PCB5 846 aaPredicted RBP18.02■□□□□ 0.48
SCN3B-202ENST00000392770 MICALL2Q8IY33 904 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 FBF1Q8TES7 1133 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 HINFPQ9BQA5 517 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 TRIM7Q9C029 511 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 WDR64B1ANS9 1081 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 PRPF38AQ8NAV1 312 aaKnown RBP18.02■□□□□ 0.48
SCN3B-202ENST00000392770 NSUN6Q8TEA1 469 aaKnown RBP18.02■□□□□ 0.48
SCN3B-202ENST00000392770 FAM81BQ96LP2 452 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 KRT12Q99456 494 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 MIS12Q9H081 205 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 ALDH3A1P30838 453 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 Q3C1V9 767 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 MSTO1Q9BUK6 570 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 ZNF70Q9UC06 446 aaPredicted RBP18.02■□□□□ 0.48
SCN3B-202ENST00000392770 FBXO40Q9UH90 709 aa18.02■□□□□ 0.48
SCN3B-202ENST00000392770 PPFIA1Q13136 1202 aa18.02■□□□□ 0.47
SCN3B-202ENST00000392770 SETDB1Q15047 1291 aa18.02■□□□□ 0.47
SCN3B-202ENST00000392770 CCDC125Q86Z20 511 aa18.02■□□□□ 0.47
SCN3B-202ENST00000392770 ANAPC4Q9UJX5 808 aa18.02■□□□□ 0.47
SCN3B-202ENST00000392770 LGALS16A8MUM7 142 aa18.02■□□□□ 0.47
SCN3B-202ENST00000392770 CAPN9O14815 690 aa18.02■□□□□ 0.47
SCN3B-202ENST00000392770 FDPSP14324 419 aaKnown RBP18.02■□□□□ 0.47
SCN3B-202ENST00000392770 CFAP157Q5JU67 520 aa18.02■□□□□ 0.47
SCN3B-202ENST00000392770 TOGARAM2Q6ZUX3 1019 aa18.02■□□□□ 0.47
SCN3B-202ENST00000392770 TRIM11Q96F44 468 aa18.02■□□□□ 0.47
SCN3B-202ENST00000392770 PSMD14O00487 310 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 CASC4Q6P4E1 433 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 RPS6KC1Q96S38 1066 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 STIM2Q9P246 746 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 HPS5Q9UPZ3 1129 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 METTL16Q86W50 562 aaKnown RBP18.01■□□□□ 0.47
SCN3B-202ENST00000392770 POLD4Q9HCU8 107 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.01■□□□□ 0.47
SCN3B-202ENST00000392770 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 IFNB1P01574 187 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 NR3C1P04150 777 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 TRIM50Q86XT4 487 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 PROM2Q8N271 834 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 MICALL1Q8N3F8 863 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 FTCDO95954 541 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 ZBTB12Q9Y330 459 aaPredicted RBP18.01■□□□□ 0.47
SCN3B-202ENST00000392770 MAPK4P31152 587 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 MTMR2Q13614 643 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 RSPH3Q86UC2 560 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 LDHDQ86WU2 507 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 FAM193BQ96PV7 902 aaPredicted RBP18.01■□□□□ 0.47
SCN3B-202ENST00000392770 RABEP2Q9H5N1 569 aa18.01■□□□□ 0.47
SCN3B-202ENST00000392770 STXBP3O00186 592 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 C2orf54Q08AI8 447 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 KRT71Q3SY84 523 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 EIF2AK1Q9BQI3 630 aaKnown RBP18■□□□□ 0.47
SCN3B-202ENST00000392770 ENTPD3O75355 529 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 VPS41P49754 854 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 KRT76Q01546 638 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 PPP2R5DQ14738 602 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 C10orf76Q5T2E6 689 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 GIMAP8Q8ND71 665 aaPredicted RBP18■□□□□ 0.47
SCN3B-202ENST00000392770 NLRP4Q96MN2 994 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 TTLL3Q9Y4R7 772 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 CD2APQ9Y5K6 639 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 IFT172Q9UG01 1749 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 CNTNAP5Q8WYK1 1306 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 BCL9O00512 1426 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 GPR75-ASB3A0A0A6YYF3 556 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 GYS1P13807 737 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 IFRD2Q12894 506 aaPredicted RBP18■□□□□ 0.47
SCN3B-202ENST00000392770 CYP27A1Q02318 531 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 ABHD10Q9NUJ1 306 aa18■□□□□ 0.47
SCN3B-202ENST00000392770 K7ERI5 159 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 MYO1FO00160 1098 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 XPOTO43592 962 aaKnown RBP17.99■□□□□ 0.47
SCN3B-202ENST00000392770 SLC10A5Q5PT55 438 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 PDS5AQ29RF7 1337 aaKnown RBP17.99■□□□□ 0.47
SCN3B-202ENST00000392770 IRX5P78411 483 aaPredicted RBP17.99■□□□□ 0.47
SCN3B-202ENST00000392770 GUCY2DQ02846 1103 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 NSMCE1Q8WV22 266 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 SALL3Q9BXA9 1300 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 FGFR2P21802 821 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 NEK9Q8TD19 979 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 TCP11Q8WWU5 503 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 RABGGTAQ92696 567 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 OTUD5Q96G74 571 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 LXNQ9BS40 222 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 P4HBP07237 508 aaKnown RBP17.99■□□□□ 0.47
SCN3B-202ENST00000392770 PDHBP11177 359 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 SMC6Q96SB8 1091 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 NYAP2Q9P242 653 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 PTPN22Q9Y2R2 807 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 IPO5O00410 1097 aaKnown RBP17.99■□□□□ 0.47
SCN3B-202ENST00000392770 KRT15P19012 456 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 CXCR5P32302 372 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 FYB2Q5VWT5 728 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 ZNF302Q9NR11 478 aa17.99■□□□□ 0.47
SCN3B-202ENST00000392770 NXF1Q9UBU9 619 aaKnown RBP17.99■□□□□ 0.47
SCN3B-202ENST00000392770 NDUFAB1O14561 156 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 SLC16A4O15374 487 aa17.98■□□□□ 0.47
SCN3B-202ENST00000392770 CASP7P55210 303 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms