RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 MSH4O15457 936 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 NCK2O43639 380 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 BUB1O43683 1085 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 MYBL2P10244 700 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 HNRNPH2P55795 449 aaKnown RBP13.54□□□□□ -0.24
RFC5-201ENST00000392542 FRMD5Q7Z6J6 570 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 SFR1Q86XK3 245 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 FLAD1Q8NFF5 587 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 ZBTB9Q96C00 473 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 TLR10Q9BXR5 811 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 AIPL1Q9NZN9 384 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 HDAC9Q9UKV0 1011 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 VAV3Q9UKW4 847 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 ZC3H4Q9UPT8 1303 aaKnown RBP13.54□□□□□ -0.24
RFC5-201ENST00000392542 OPLAHO14841 1288 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 ENTPD3O75355 529 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 APBA1Q02410 837 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 ASIC2Q16515 512 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 SLC18A3Q16572 532 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 KNOP1Q1ED39 458 aaKnown RBP13.54□□□□□ -0.24
RFC5-201ENST00000392542 RBM26Q5T8P6 1007 aaKnown RBP13.54□□□□□ -0.24
RFC5-201ENST00000392542 CCDC181Q5TID7 509 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 GSPT2Q8IYD1 628 aaKnown RBP13.54□□□□□ -0.24
RFC5-201ENST00000392542 TBC1D5Q92609 795 aa13.54□□□□□ -0.24
RFC5-201ENST00000392542 COL2A1P02458 1487 aaPredicted RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 CALUO43852 315 aaPredicted RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 GH2P01242 217 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 CYP3A4P08684 503 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 TAL1P17542 331 aaPredicted RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 PAFAH1B1P43034 410 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 NAP1L1P55209 391 aaKnown RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 JAG1P78504 1218 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 STYK1Q6J9G0 422 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 LRRC1Q9BTT6 524 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 SELENOOQ9BVL4 669 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 TDRD3Q9H7E2 651 aaKnown RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 ARMCX3Q9UH62 379 aaPredicted RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 A0A0U1RQG5 324 aaPredicted RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 PDXKO00764 312 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 SYF2O95926 243 aaKnown RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 MYBP10242 640 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 CXCR5P32302 372 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 HOXD13P35453 343 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 KLHL30Q0D2K2 578 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 NAB2Q15742 525 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 EZH2Q15910 746 aaKnown RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 BMT2Q1RMZ1 405 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 MUM1L1Q5H9M0 696 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 AENQ8WTP8 325 aaKnown RBP13.53□□□□□ -0.24
RFC5-201ENST00000392542 PSMB7Q99436 277 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 PLCB1Q9NQ66 1216 aa13.53□□□□□ -0.24
RFC5-201ENST00000392542 PIK3CDO00329 1044 aa13.52□□□□□ -0.24
RFC5-201ENST00000392542 PRPF6O94906 941 aaKnown RBP13.52□□□□□ -0.24
RFC5-201ENST00000392542 AFPP02771 609 aaKnown RBP13.52□□□□□ -0.24
RFC5-201ENST00000392542 HOXA13P31271 388 aaPredicted RBP13.52□□□□□ -0.24
RFC5-201ENST00000392542 DPY19L2P1Q6NXN4 242 aa13.52□□□□□ -0.24
RFC5-201ENST00000392542 EIF2AK1Q9BQI3 630 aaKnown RBP13.52□□□□□ -0.24
RFC5-201ENST00000392542 SMARCAL1Q9NZC9 954 aa13.52□□□□□ -0.24
RFC5-201ENST00000392542 EHD2Q9NZN4 543 aa13.52□□□□□ -0.24
RFC5-201ENST00000392542 RNF14Q9UBS8 474 aa13.52□□□□□ -0.24
RFC5-201ENST00000392542 DMGDHQ9UI17 866 aaKnown RBP13.52□□□□□ -0.24
RFC5-201ENST00000392542 PRR12Q9ULL5 1215 aa13.52□□□□□ -0.24
RFC5-201ENST00000392542 SYNPO2Q9UMS6 1093 aa13.52□□□□□ -0.24
RFC5-201ENST00000392542 A0A087X0T9 212 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 A0A1W2PRG0 241 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 H0YIN7 160 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 PHACTR2O75167 634 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 EYA4O95677 639 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 FAM228BP0C875 321 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 ZNF76P36508 570 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 CYP4A11Q02928 519 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 RRP1BQ14684 758 aaKnown RBP13.52□□□□□ -0.25
RFC5-201ENST00000392542 MSL1Q68DK7 614 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 HDAC7Q8WUI4 952 aa13.52□□□□□ -0.25
RFC5-201ENST00000392542 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.52□□□□□ -0.25
RFC5-201ENST00000392542 TYW1Q9NV66 732 aaKnown RBP13.52□□□□□ -0.25
RFC5-201ENST00000392542 RSPH10B2B2RC85 870 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 PLSCR1O15162 318 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 RNF40O75150 1001 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 TBCAO75347 108 aaKnown RBP13.51□□□□□ -0.25
RFC5-201ENST00000392542 PALMO75781 387 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 RSPH10BP0C881 870 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 KLRC1P26715 233 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
RFC5-201ENST00000392542 ARID5AQ03989 594 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 CYP2W1Q8TAV3 490 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 GOLGA5Q8TBA6 731 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 GDAP1L1Q96MZ0 367 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 RUSC1Q9BVN2 902 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 BHMT2Q9H2M3 363 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
RFC5-201ENST00000392542 RABGAP1Q9Y3P9 1069 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 IGLV3-22A0A075B6J6 115 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 EML1O00423 815 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 SLC16A3O15427 465 aaKnown RBP13.51□□□□□ -0.25
RFC5-201ENST00000392542 ACTN1P12814 892 aa13.51□□□□□ -0.25
RFC5-201ENST00000392542 XRCC5P13010 732 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms