RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 DENND5AQ6IQ26 1287 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 KCNT2Q6UVM3 1135 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 ARHGAP36Q6ZRI8 547 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 C16orf59Q7L2K0 433 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 CXXC5Q7LFL8 322 aaKnown RBP2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 OTOP2Q7RTS6 562 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 ZC3H7AQ8IWR0 971 aaKnown RBP2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 RTKN2Q8IZC4 609 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 CELF2-AS1Q8N7Q2 184 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 STPG3Q8N7X2 389 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 CLEC4DQ8WXI8 215 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 OSBP2Q969R2 916 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 ARMC5Q96C12 935 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 AJUBAQ96IF1 538 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 MAGEB10Q96LZ2 347 aaPredicted RBP2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 LRRC37BQ96QE4 947 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 SYT3Q9BQG1 590 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 TACO1Q9BSH4 297 aaKnown RBP2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 VPS11Q9H270 941 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 IPPKQ9H8X2 491 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 ARHGEF4Q9NR80 690 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 PPP4R1LQ9P1A2 415 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 SRPK3Q9UPE1 567 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 SLC4A7Q9Y6M7 1214 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 ESYT3A0FGR9 886 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 BLACEA4D250 179 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 NKRFO15226 690 aaKnown RBP eCLIP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 MATN3O15232 486 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 CYP27B1O15528 508 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 KLHL18O94889 574 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 NPTXRO95502 500 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 KNG1P01042 644 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 LTFP02788 710 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 HMGCRP04035 888 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 SRGAP2CP0DJJ0 459 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 C6P13671 934 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 PTPN1P18031 435 aaKnown RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 TNFRSF1AP19438 455 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 CR2P20023 1033 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 CSF2RBP32927 897 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 GTF2F1P35269 517 aaKnown RBP eCLIP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 RPS19P39019 145 aaKnown RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 ETV4P43268 484 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 DNM2P50570 870 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 HMGA2P52926 109 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 SESN2P58004 480 aaPredicted RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 HERVK_113P62684 666 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 DBPQ10586 325 aaPredicted RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 ZNF585AQ6P3V2 769 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 LRP10Q7Z4F1 713 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 POLNQ7Z5Q5 900 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 PALM2Q8IXS6 379 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 ZBTB38Q8NAP3 1195 aaPredicted RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 HIPK4Q8NE63 616 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 NUDT10Q8NFP7 164 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 NEIL1Q96FI4 390 aaPredicted RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 NUDT11Q96G61 164 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 DHRS4Q9BTZ2 278 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 CD244Q9BZW8 370 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 PDGFDQ9GZP0 370 aaPredicted RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 CSRNP2Q9H175 543 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 INCENPQ9NQS7 918 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 KCND1Q9NSA2 647 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 AURKAIP1Q9NWT8 199 aaPredicted RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 GALNT8Q9NY28 637 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 PPARGC1AQ9UBK2 798 aaKnown RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 PFDN2Q9UHV9 154 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 PUF60Q9UHX1 559 aaKnown RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 ZFR2Q9UPR6 939 aaKnown RBP2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 NR2E1Q9Y466 385 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 TESMINQ9Y4I5 508 aa2.02□□□□□ -2.09
SNORD28B-201ENST00000390993 KDM2BQ8NHM5 1336 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 CCDC66A2RUB6 948 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 PATE3B3GLJ2 98 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 B4E1Z4 1266 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 ARNTLO00327 626 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 WNT9AO14904 365 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 GPR42O15529 346 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 ARHGAP6O43182 974 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 CDC14BO60729 498 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 CLASP2O75122 1294 aaKnown RBP2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 CNOT4O95628 575 aaKnown RBP2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 CAPNS1P04632 268 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 PYGMP11217 842 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 PDE6AP16499 860 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 COMTP21964 271 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 PTGS1P23219 599 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 AOAHP28039 575 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 FLT3P36888 993 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 RANGAP1P46060 587 aaPredicted RBP2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 RRADP55042 308 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 ABHD18Q0P651 414 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 ICAM4Q14773 271 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 NTRK3Q16288 839 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 ARHGAP44Q17R89 818 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 NRN1LQ496H8 165 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 HABP4Q5JVS0 413 aaKnown RBP2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 ZNF662Q6ZS27 426 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 GPR155Q7Z3F1 870 aa2.01□□□□□ -2.09
SNORD28B-201ENST00000390993 TAX1BP1Q86VP1 789 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms