RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 PDGFAP04085 211 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 RPLP1P05386 114 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 POLR3DP05423 398 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 IFIT2P09913 472 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 FAM200BP0CF97 657 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 PNMA6AP0CW24 399 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ESRRAP11474 423 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SKILP12757 684 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 NAT1P18440 290 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 MX1P20591 662 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 GPTP24298 496 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 MAOBP27338 520 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 TPP2P29144 1249 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 OAS2P29728 719 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SLC8A1P32418 973 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 GBP2P32456 591 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 FLT3P36888 993 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 CD96P40200 585 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 PSMD7P51665 324 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 MRPL12P52815 198 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SH3BGRP55822 239 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 DDR1Q08345 913 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 GRIK3Q13003 919 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 MTX1Q13505 466 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 MTMR3Q13615 1198 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 LAMB3Q13751 1172 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 MAP7Q14244 749 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 PDIA5Q14554 519 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SLMAPQ14BN4 828 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 IQCB1Q15051 598 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 PTPN14Q15678 1187 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ELF2Q15723 593 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 CCDC57Q2TAC2 916 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 PARP10Q53GL7 1025 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 CCDC178Q5BJE1 867 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 RRP12Q5JTH9 1297 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 FBXO38Q6PIJ6 1188 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ARHGAP27Q6ZUM4 889 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SPATA21Q7Z572 469 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SPRED2Q7Z698 418 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 IQCA1Q86XH1 822 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SPATS2Q86XZ4 545 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 DZIP1Q86YF9 867 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 APLFQ8IW19 511 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 MFN1Q8IWA4 741 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 IQCF2Q8IXL9 164 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ANKRD13AQ8IZ07 590 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 CLASRPQ8N2M8 674 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 NME8Q8N427 588 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SAMD3Q8N6K7 520 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 FAM181AQ8N9Y4 354 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ZBTB38Q8NAP3 1195 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 LINC00116Q8NCU8 138 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 FAM81AQ8TBF8 368 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 MICAL1Q8TDZ2 1067 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ZNF483Q8TF39 744 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 BCL7CQ8WUZ0 217 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 FAM168AQ92567 244 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 JARID2Q92833 1246 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SMARCE1Q969G3 411 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 JAKMIP2Q96AA8 810 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 BICD1Q96G01 975 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 CCDC114Q96M63 670 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 C16orf45Q96MC5 204 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 PLEKHG4BQ96PX9 1271 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 OSBPL9Q96SU4 736 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 TCHPQ9BT92 498 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SRRTQ9BXP5 876 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SIL1Q9H173 461 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SEMA6CQ9H3T2 930 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 SUGCTQ9HAC7 445 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 RC3H2Q9HBD1 1191 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 PDRG1Q9NUG6 133 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ZNHIT6Q9NWK9 470 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 TMOD4Q9NZQ9 345 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 KIAA1522Q9P206 1035 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 MAGEC2Q9UBF1 373 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 TRMT112Q9UI30 125 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 MCM8Q9UJA3 840 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 FOXD3Q9UJU5 478 aaPredicted RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 DCTN4Q9UJW0 460 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 BLOC1S6Q9UL45 172 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 PA2G4Q9UQ80 394 aaKnown RBP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 NIP7Q9Y221 180 aaKnown RBP eCLIP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.95□□□□□ -1.94
TRAV41-201ENST00000390468 DUOX1Q9NRD9 1551 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 ADAMTSL1Q8N6G6 1762 aa2.95□□□□□ -1.94
TRAV41-201ENST00000390468 AOX1Q06278 1338 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 TTC41PQ6P2S7 1318 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 UBN2Q6ZU65 1347 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 SH3TC1Q8TE82 1336 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 ATXN2Q99700 1313 aaKnown RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 SCN9AQ15858 1988 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 GOLGA6L7A0A1B0GV03 622 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 DBX1A6NMT0 343 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 PDLIM1O00151 329 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 IRS4O14654 1257 aaPredicted RBP2.94□□□□□ -1.94
TRAV41-201ENST00000390468 AHCYL1O43865 530 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 OPA1O60313 960 aa2.94□□□□□ -1.94
TRAV41-201ENST00000390468 PDE8AO60658 829 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms