RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ZNF280CQ8ND82 737 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 LPIN2Q92539 896 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 RNF103-CHMP3A0A140T963 221 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 E2F6O75461 281 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 MAP4P27816 1152 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 TMOD1P28289 359 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 CYP27A1Q02318 531 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 DARS2Q6PI48 645 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 KCTD6Q8NC69 237 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 ZNF473Q8WTR7 871 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 RAPGEF5Q92565 580 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 SUCLG2Q96I99 432 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 C10orf88Q9H8K7 445 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 GIMAP4Q9NUV9 329 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 L3MBTL1Q9Y468 752 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 LRRC8BQ6P9F7 803 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 SLC26A7Q8TE54 656 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 PCDHB4Q9Y5E5 795 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 LRRIQ1Q96JM4 1722 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 CTIFO43310 598 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 ATP1A3P13637 1013 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 USP14P54578 494 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 MORF4L2Q15014 288 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 ARMCX5Q6P1M9 558 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 DCTN4Q9UJW0 460 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 KRT28Q7Z3Y7 464 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 ZC3H12CQ9C0D7 883 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 SUCLA2Q9P2R7 463 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 SEPT3Q9UH03 358 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 H0Y626 953 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 TRIM16O95361 564 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 CARSP49589 748 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 GJA10Q969M2 543 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 CHL1O00533 1208 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 GFPT2O94808 682 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 ZAP70P43403 619 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 MED21Q13503 144 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 ATP6V1E2Q96A05 226 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 ZNF594Q96JF6 807 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 RMDN2Q96LZ7 410 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 CCT8L2Q96SF2 557 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 CCDC90BQ9GZT6 254 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 ATP11BQ9Y2G3 1177 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 ECM2O94769 699 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 MRPS25P82663 173 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 LAMB3Q13751 1172 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 ADCK5Q3MIX3 580 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 FMNL1O95466 1100 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 KITP10721 976 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 MDH1P40925 334 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 MB21D1Q8N884 522 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 DEPTORQ8TB45 409 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 NT5C1BQ96P26 610 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 KIF17Q9P2E2 1029 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 SERPINB3P29508 390 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 DNAAF3Q8N9W5 541 aa13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-202ENST00000383836 POLD1P28340 1107 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 NAA30Q147X3 362 aaPredicted RBP13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 GRAMD1CQ8IYS0 662 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 NSUN7Q8NE18 718 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 SKA2Q8WVK7 121 aaPredicted RBP13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 PRMT1Q99873 361 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 PSTPIP2Q9H939 334 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 RHBDL2Q9NX52 303 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 COPG1Q9Y678 874 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 CCDC22O60826 627 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 CHEK2O96017 543 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 RHOT2Q8IXI1 618 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 MAP4K1Q92918 833 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 SH3GL2Q99962 352 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 PLB1Q6P1J6 1458 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 HSPA9P38646 679 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 GID8Q9NWU2 228 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 PPP1R37O75864 691 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 SAYSD1Q9NPB0 183 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 ARL2BPQ9Y2Y0 163 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 A0A1B0GW55 424 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 TJP3O95049 919 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 DUX4L2P0CJ85 424 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 DUX4L3P0CJ86 424 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 DUX4L4P0CJ87 422 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 DUX4L5P0CJ88 424 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 DUX4L6P0CJ89 424 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 DUX4L7P0CJ90 424 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 DUX4Q9UBX2 424 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 ZBTB41Q5SVQ8 909 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 TRIM67Q6ZTA4 783 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 G3BP2Q9UN86 482 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 GRIN2AQ12879 1464 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 USP27XA6NNY8 438 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 ARFIP2P53365 341 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 DYNLT1P63172 113 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms