RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 EP400NLQ6ZTU2 488 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 CCDC155Q8N6L0 562 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 LSM14BQ9BX40 385 aaKnown RBP20.57■□□□□ 0.88
CSPG5-202ENST00000383738 XRCC5P13010 732 aaKnown RBP20.57■□□□□ 0.88
CSPG5-202ENST00000383738 PCK1P35558 622 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 POLR2FP61218 127 aaKnown RBP20.57■□□□□ 0.88
CSPG5-202ENST00000383738 TRIM65Q6PJ69 517 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 LRRC31Q6UY01 552 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 TRIM6Q9C030 488 aaPredicted RBP20.57■□□□□ 0.88
CSPG5-202ENST00000383738 CXorf56Q9H5V9 222 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 KDM3AQ9Y4C1 1321 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 FMN2Q9NZ56 1722 aa20.57■□□□□ 0.88
CSPG5-202ENST00000383738 GOLGA8IPA6NC78 632 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 GOLGA8JA6NMD2 632 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 CALUO43852 315 aaPredicted RBP20.56■□□□□ 0.88
CSPG5-202ENST00000383738 MUM1L1Q5H9M0 696 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 DDX12PQ92771 950 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 PANX2Q96RD6 677 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 HACL1Q9UJ83 578 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 MED1Q15648 1581 aaPredicted RBP20.56■□□□□ 0.88
CSPG5-202ENST00000383738 CD19P15391 556 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 ERCC5P28715 1186 aaPredicted RBP20.56■□□□□ 0.88
CSPG5-202ENST00000383738 KLHL30Q0D2K2 578 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 BEND6Q5SZJ8 279 aaPredicted RBP20.56■□□□□ 0.88
CSPG5-202ENST00000383738 TRIM58Q8NG06 486 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 GOLGA8KD6RF30 607 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 KRT14P02533 472 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 CERS5Q8N5B7 392 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 ANKRD42Q8N9B4 389 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 PRPF38AQ8NAV1 312 aaKnown RBP20.56■□□□□ 0.88
CSPG5-202ENST00000383738 AGBL1Q96MI9 1066 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 APOL6Q9BWW8 343 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 ABHD10Q9NUJ1 306 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 COL4A3BPQ9Y5P4 624 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 A0A1W2PRG0 241 aa20.56■□□□□ 0.88
CSPG5-202ENST00000383738 TTC26A0AVF1 554 aa20.55■□□□□ 0.88
CSPG5-202ENST00000383738 PLSCR1O15162 318 aa20.55■□□□□ 0.88
CSPG5-202ENST00000383738 SEC24CP53992 1094 aa20.55■□□□□ 0.88
CSPG5-202ENST00000383738 ARMC9Q7Z3E5 817 aa20.55■□□□□ 0.88
CSPG5-202ENST00000383738 PRR12Q9ULL5 1215 aa20.55■□□□□ 0.88
CSPG5-202ENST00000383738 HNRNPDLO14979 420 aaKnown RBP20.55■□□□□ 0.88
CSPG5-202ENST00000383738 FAM133BQ5BKY9 247 aaKnown RBP20.55■□□□□ 0.88
CSPG5-202ENST00000383738 NBPF12Q5TAG4 269 aaPredicted RBP20.55■□□□□ 0.88
CSPG5-202ENST00000383738 PPP4CP60510 307 aa20.55■□□□□ 0.88
CSPG5-202ENST00000383738 KCTD19Q17RG1 926 aaPredicted RBP20.55■□□□□ 0.88
CSPG5-202ENST00000383738 JMJD4Q9H9V9 463 aa20.55■□□□□ 0.88
CSPG5-202ENST00000383738 HYOU1Q9Y4L1 999 aa20.55■□□□□ 0.88
CSPG5-202ENST00000383738 WDR19Q8NEZ3 1342 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 PLCB3Q01970 1234 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 SNCBQ16143 134 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 NFRKBQ6P4R8 1299 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 NALCNQ8IZF0 1738 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 INO80B-WBP1J3KQ70 363 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 OTUD6AQ7L8S5 288 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 PPM1KQ8N3J5 372 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 COG1Q8WTW3 980 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 TSGA10Q9BZW7 698 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 INO80BQ9C086 356 aaPredicted RBP20.54■□□□□ 0.88
CSPG5-202ENST00000383738 EHD2Q9NZN4 543 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 HERC5Q9UII4 1024 aaKnown RBP20.54■□□□□ 0.88
CSPG5-202ENST00000383738 STK36Q9NRP7 1315 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 PDXDC2PQ6P474 469 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 RBM43Q6ZSC3 357 aaKnown RBP20.54■□□□□ 0.88
CSPG5-202ENST00000383738 TRIML1Q8N9V2 468 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 DCAF4Q8WV16 495 aa20.54■□□□□ 0.88
CSPG5-202ENST00000383738 TNFAIP3P21580 790 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 NCAPHQ15003 741 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 GRIPAP1Q4V328 841 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 POMGNT1Q8WZA1 660 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 NHEJ1Q9H9Q4 299 aaPredicted RBP20.53■□□□□ 0.88
CSPG5-202ENST00000383738 IL17RBQ9NRM6 502 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 MYO1AQ9UBC5 1043 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 PACSIN2Q9UNF0 486 aaPredicted RBP20.53■□□□□ 0.88
CSPG5-202ENST00000383738 SRGAP2CP0DJJ0 459 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 FCER1AP12319 257 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 NR1D1P20393 614 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 GUCY2CP25092 1073 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 CETN2P41208 172 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 NEDD9Q14511 834 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 FAM160B2Q86V87 743 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 FAM151AQ8WW52 585 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 ALDH8A1Q9H2A2 487 aaPredicted RBP20.53■□□□□ 0.88
CSPG5-202ENST00000383738 CEP83Q9Y592 693 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 CNTNAP5Q8WYK1 1306 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 LRRN2O75325 713 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 SLCO1A2P46721 670 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 LIG4P49917 911 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 TRPC3Q13507 836 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 SHROOM1Q2M3G4 852 aaPredicted RBP20.53■□□□□ 0.88
CSPG5-202ENST00000383738 FAM184BQ9ULE4 1060 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 CLGNO14967 610 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 ZRANB2O95218 330 aaKnown RBP eCLIP20.53■□□□□ 0.88
CSPG5-202ENST00000383738 RPS6KA1Q15418 735 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 SLC9C1Q4G0N8 1177 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 WDR44Q5JSH3 913 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 RPGRIP1Q96KN7 1286 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 LRRC1Q9BTT6 524 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 PHF20Q9BVI0 1012 aa20.53■□□□□ 0.88
CSPG5-202ENST00000383738 MON2Q7Z3U7 1717 aa20.52■□□□□ 0.88
CSPG5-202ENST00000383738 NPHP3-ACAD11A0A0J9YXS1 232 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms