RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SMARCA5O60264 1052 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 HNRNPH2P55795 449 aaKnown RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 LAMB3Q13751 1172 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 C2orf69Q8N8R5 385 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 FAM193BQ96PV7 902 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 JPH2Q9BR39 696 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 ORC6Q9Y5N6 252 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 MED1Q15648 1581 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 ERCC6L2Q5T890 1561 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 MAGEA13PA6NCF6 341 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 ZNF839A8K0R7 811 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 IDH3BO43837 385 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 PARNO95453 639 aaKnown RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 PALB2Q86YC2 1186 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 KLHL23Q8NBE8 558 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 CCT6BQ92526 530 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 AMFRQ9UKV5 643 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 GRM8O00222 908 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 ZBTB7BO15156 539 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 RNMTO43148 476 aaKnown RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 IREB2P48200 963 aaKnown RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 SNRPFP62306 86 aaKnown RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 CYTH1Q15438 398 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 SUPT20HL1Q3ZLR7 823 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 C17orf50Q8WW18 174 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 ECT2Q9H8V3 914 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 SPON1Q9HCB6 807 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 DMAP1Q9NPF5 467 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 DDX21Q9NR30 783 aaKnown RBP eCLIP5.26□□□□□ -1.577e-6■■■■■ 43.5
PTPRD-203ENST00000381196 TNNQ9UQP3 1299 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 ACTL7BQ9Y614 415 aa5.26□□□□□ -1.57
PTPRD-203ENST00000381196 NPHP4O75161 1426 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-203ENST00000381196 MROH7Q68CQ1 1323 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 GOLGA8CPA6NN73 597 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 CHL1O00533 1208 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PRPF3O43395 683 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MYCLP12524 364 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 HOXC9P31274 260 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PPP2R2AP63151 447 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 TAF11Q15544 211 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 RBM20Q5T481 1227 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MFSD4BQ5TF39 518 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 RRAGBQ5VZM2 374 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PPP1R18Q6NYC8 613 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 HORMAD1Q86X24 394 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MIGA1Q8NAN2 632 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 RNF169Q8NCN4 708 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 ANKHQ9HCJ1 492 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 SAP30BPQ9UHR5 308 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 VAMP4O75379 141 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 ACTN3Q08043 901 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MTX1Q13505 466 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 SKIV2LQ15477 1246 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 KAZNQ674X7 775 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PRR23BQ6ZRT6 265 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 DPP9Q86TI2 863 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 BEST2Q8NFU1 509 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 INPP5DQ92835 1189 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 VPS50Q96JG6 964 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 CARD14Q9BXL6 1004 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 STN1Q9H668 368 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 TACC3Q9Y6A5 838 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 RNF113AO15541 343 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 SPAG7O75391 227 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 H7C0S8 307 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MYBL1P10243 752 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 OSBPP22059 807 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 NUP107P57740 925 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PUM3Q15397 648 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 KRT79Q5XKE5 535 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 CHST3Q7LGC8 479 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 FERMT3Q86UX7 667 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 CDAN1Q8IWY9 1227 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 MAGEB6Q8N7X4 407 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PDPRQ8NCN5 879 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 SSH3Q8TE77 659 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 USP33Q8TEY7 942 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 RNF34Q969K3 372 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PAWRQ96IZ0 340 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 CCDC138Q96M89 665 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 ZFATQ9P243 1243 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 SETD1BQ9UPS6 1966 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 CCDC78A2IDD5 438 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 GRIN3BO60391 1043 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 GCLCP48506 637 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 HHATQ5VTY9 493 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 RASGRP2Q7LDG7 609 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 HS2ST1Q7LGA3 356 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 TXNDC16Q9P2K2 825 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 FAM83GA6ND36 823 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 PPP1R37O75864 691 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 CHRNA3P32297 505 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 GSCP56915 257 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 OCA2Q04671 838 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 STX3Q13277 289 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 EIF4A2Q14240 407 aaKnown RBP5.25□□□□□ -1.57
PTPRD-203ENST00000381196 IRGCQ6NXR0 463 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 TMC4Q7Z404 712 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 GLG1Q92896 1179 aa5.25□□□□□ -1.57
PTPRD-203ENST00000381196 OPTNQ96CV9 577 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms