RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 CEP63Q96MT8 703 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 SELENOSQ9BQE4 189 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 AP5M1Q9H0R1 490 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 FCER1AP12319 257 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 SFNP31947 248 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 IQCB1Q15051 598 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 CCDC144BQ3MJ40 725 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 DEFB129Q9H1M3 183 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 GGA3Q9NZ52 723 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 MED1Q15648 1581 aaPredicted RBP13.35□□□□□ -0.27
GABPB1-203ENST00000380877 NR3C1P04150 777 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 ATP2A2P16615 1042 aaKnown RBP13.35□□□□□ -0.27
GABPB1-203ENST00000380877 RPS12P25398 132 aaKnown RBP13.35□□□□□ -0.27
GABPB1-203ENST00000380877 COG2Q14746 738 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 NTRK3Q16288 839 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 PODXL2Q9NZ53 605 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 FAM205AQ6ZU69 1335 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 GRIN1Q05586 938 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 PRAMEF18Q5VWM3 479 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 C2orf69Q8N8R5 385 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 FAM76AQ8TAV0 307 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 RNF34Q969K3 372 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 RGL1Q9NZL6 768 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 TUBE1Q9UJT0 475 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.34□□□□□ -0.27
GABPB1-203ENST00000380877 KRIT1O00522 736 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 PLSCR1O15162 318 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 ZEB2O60315 1214 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 KNOP1Q1ED39 458 aaKnown RBP13.34□□□□□ -0.27
GABPB1-203ENST00000380877 FBXL16Q8N461 479 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 ENGASEQ8NFI3 743 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 PPP1R14CQ8TAE6 165 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 UBE2TQ9NPD8 197 aaPredicted RBP13.34□□□□□ -0.27
GABPB1-203ENST00000380877 TEX33O43247 280 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
GABPB1-203ENST00000380877 EPHA7Q15375 998 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 ZNF280CQ8ND82 737 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 GDAP1L1Q96MZ0 367 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 GAS8O95995 478 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 KIF11P52732 1056 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 MAIP1Q8WWC4 291 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 TEX13BQ9BXU2 312 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 GABBR1Q9UBS5 961 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 DDX41Q9UJV9 622 aaKnown RBP13.34□□□□□ -0.27
GABPB1-203ENST00000380877 PCDHB4Q9Y5E5 795 aa13.34□□□□□ -0.27
GABPB1-203ENST00000380877 SERPING1P05155 500 aa13.33□□□□□ -0.27
GABPB1-203ENST00000380877 BRD3Q15059 726 aa13.33□□□□□ -0.27
GABPB1-203ENST00000380877 NLRP4Q96MN2 994 aa13.33□□□□□ -0.27
GABPB1-203ENST00000380877 TSNARE1Q96NA8 513 aa13.33□□□□□ -0.27
GABPB1-203ENST00000380877 LRRC4BQ9NT99 713 aa13.33□□□□□ -0.27
GABPB1-203ENST00000380877 HESX1Q9UBX0 185 aa13.33□□□□□ -0.27
GABPB1-203ENST00000380877 ADAMTS1Q9UHI8 967 aa13.33□□□□□ -0.27
GABPB1-203ENST00000380877 FEZ2Q9UHY8 353 aaPredicted RBP13.33□□□□□ -0.27
GABPB1-203ENST00000380877 POLR2BP30876 1174 aaKnown RBP13.33□□□□□ -0.28
GABPB1-203ENST00000380877 ST3GAL1Q11201 340 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 NAALADL2Q58DX5 795 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 INTS8Q75QN2 995 aaKnown RBP13.33□□□□□ -0.28
GABPB1-203ENST00000380877 APOL6Q9BWW8 343 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 ATP6V0A4Q9HBG4 840 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 PHLPP2Q6ZVD8 1323 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 ZNF233A6NK53 670 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 PSMC5P62195 406 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 PTPAQ15257 358 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 RBM46Q8TBY0 533 aaKnown RBP13.33□□□□□ -0.28
GABPB1-203ENST00000380877 TYW1Q9NV66 732 aaKnown RBP13.33□□□□□ -0.28
GABPB1-203ENST00000380877 RIC1Q4ADV7 1423 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 ATF7P17544 494 aaPredicted RBP13.33□□□□□ -0.28
GABPB1-203ENST00000380877 DPYDQ12882 1025 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 SWSAP1Q6NVH7 229 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 SRGAP1Q7Z6B7 1085 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 ZBTB33Q86T24 672 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 NBPF11Q86T75 865 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 XXYLT1Q8NBI6 393 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 GIMAP8Q8ND71 665 aaPredicted RBP13.33□□□□□ -0.28
GABPB1-203ENST00000380877 FAM204AQ9H8W3 233 aa13.33□□□□□ -0.28
GABPB1-203ENST00000380877 GOLGA6BA6NDN3 693 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 DAPK3O43293 454 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 EYA4O95677 639 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 BAATQ14032 418 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-203ENST00000380877 NEDD9Q14511 834 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 ANKRD36BP1Q96IX9 119 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 IQCA1LA6NCM1 817 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 MYO1FO00160 1098 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 TBX3O15119 743 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 SLC16A4O15374 487 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 KCNH2Q12809 1159 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 MESDQ14696 234 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 HPS3Q969F9 1004 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 FAM167AQ96KS9 214 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 RAB17Q9H0T7 212 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 ABHD10Q9NUJ1 306 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 PEAK1Q9H792 1746 aa13.32□□□□□ -0.28
GABPB1-203ENST00000380877 BAZ2BQ9UIF8 2168 aaKnown RBP13.32□□□□□ -0.28
GABPB1-203ENST00000380877 DDTLA6NHG4 134 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms