RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 PLCG1P19174 1290 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 TOB2Q14106 344 aaPredicted RBP18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 CATSPER1Q8NEC5 780 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 ZNF473Q8WTR7 871 aaKnown RBP18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 FAM167BQ9BTA0 163 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 ERVK-7P63135 1459 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 MLH3Q9UHC1 1453 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 SESTD1Q86VW0 696 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 PPARGC1AQ9UBK2 798 aaKnown RBP18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 RPAP1Q9BWH6 1393 aaPredicted RBP18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 WDR91A4D1P6 747 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 COPEO14579 308 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 CAPN9O14815 690 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 GGPS1O95749 300 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 STAT2P52630 851 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 NAA30Q147X3 362 aaPredicted RBP18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 TRAPPC3LQ5T215 181 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 GSPT2Q8IYD1 628 aaKnown RBP18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 UBE2TQ9NPD8 197 aaPredicted RBP18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 PLEKHG3A1L390 1219 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 MED7O43513 233 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 CHRNA3P32297 505 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 CA8P35219 290 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 IL1RL1Q01638 556 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 ICA1LQ8NDH6 482 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 KCNV2Q8TDN2 545 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 ETNK1Q9HBU6 452 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 A0A1W2PQC6 194 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 ESYT2A0FGR8 921 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 ARL4CP56559 192 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 NR5A1Q13285 461 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 DNAJC24Q6P3W2 148 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 GIPC2Q8TF65 315 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 NUDCD1Q96RS6 583 aa18.38■□□□□ 0.53
COL4A3BP-203ENST00000380494 ATP7BP35670 1465 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 BRDTQ58F21 947 aaPredicted RBP18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 SMYD2Q9NRG4 433 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 TBX22Q9Y458 520 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 TJP3O95049 919 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 KRT10P13645 584 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 ZSCAN20P17040 1043 aaPredicted RBP18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 ARHGEF5Q12774 1597 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 GPATCH4Q5T3I0 446 aaKnown RBP18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 EEF2KMTQ96G04 330 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 SPC25Q9HBM1 224 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 SLC30A9Q6PML9 568 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 CFAP36Q96G28 342 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 TRIM33Q9UPN9 1127 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 ZFXP17010 805 aaPredicted RBP18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 TRIP13Q15645 432 aaPredicted RBP18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 HACE1Q8IYU2 909 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 MXD3Q9BW11 206 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 SAYSD1Q9NPB0 183 aa18.37■□□□□ 0.53
COL4A3BP-203ENST00000380494 GOLGA8HP0CJ92 632 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 TMPRSS15P98073 1019 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 SNX24Q9Y343 169 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 NOC2LQ9Y3T9 749 aaKnown RBP18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 RGS9BPQ6ZS82 235 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 UNC13DQ70J99 1090 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 FOXP2O15409 715 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 CASP2P42575 452 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 MED10Q9BTT4 135 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 CFLARO15519 480 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 CCND1P24385 295 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 HSPA9P38646 679 aaKnown RBP18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 CCZ1BP86790 482 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 CCZ1P86791 482 aaPredicted RBP18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 DPP8Q6V1X1 898 aaPredicted RBP18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 TBCKQ8TEA7 893 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 POLR3CQ9BUI4 534 aaPredicted RBP18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 LRRN2O75325 713 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 VSNL1P62760 191 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 PABPC4Q13310 644 aaKnown RBP eCLIP18.36■□□□□ 0.532e-17■■■■□ 21.8
COL4A3BP-203ENST00000380494 DHX34Q14147 1143 aaKnown RBP18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 ARHGEF16Q5VV41 709 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 KCTD6Q8NC69 237 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 GINM1Q9NU53 330 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 ANKFY1Q9P2R3 1169 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 ADAMTS1Q9UHI8 967 aa18.36■□□□□ 0.53
COL4A3BP-203ENST00000380494 ZC4H2Q9NQZ6 224 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 PRDM15P57071 1507 aaPredicted RBP18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 CORO7P57737 925 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 IFRD2Q12894 506 aaPredicted RBP18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 RBM41Q96IZ5 413 aaKnown RBP18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 NACC1Q96RE7 527 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 WDR11Q9BZH6 1224 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 KRT82Q9NSB4 513 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 CAPN11Q9UMQ6 739 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 PDE8BO95263 885 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 HDAC4P56524 1084 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 NSMFQ6X4W1 530 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 SCHIP1Q9P0W5 487 aaPredicted RBP18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 ARL2BPQ9Y2Y0 163 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 ZDHHC9Q9Y397 364 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 HSPA4LO95757 839 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 ARFIP2P53365 341 aa18.35■□□□□ 0.53
COL4A3BP-203ENST00000380494 LRRC53A6NM62 1247 aa18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 CYP2E1P05181 493 aaPredicted RBP18.34■□□□□ 0.53
COL4A3BP-203ENST00000380494 KCNA4P22459 653 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms