RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TADA3O75528 432 aa25.51■■□□□ 1.67
VPS16-201ENST00000380443 RPL13P26373 211 aaKnown RBP25.51■■□□□ 1.67
VPS16-201ENST00000380443 KLK7P49862 253 aa25.51■■□□□ 1.67
VPS16-201ENST00000380443 CYP4A11Q02928 519 aa25.51■■□□□ 1.67
VPS16-201ENST00000380443 SFR1Q86XK3 245 aa25.51■■□□□ 1.67
VPS16-201ENST00000380443 AGBL1Q96MI9 1066 aa25.51■■□□□ 1.67
VPS16-201ENST00000380443 MMRN2Q9H8L6 949 aa25.51■■□□□ 1.67
VPS16-201ENST00000380443 ZNF112Q9UJU3 913 aa25.51■■□□□ 1.67
VPS16-201ENST00000380443 PPP1R9AQ9ULJ8 1098 aa25.51■■□□□ 1.67
VPS16-201ENST00000380443 DDNO94850 711 aaPredicted RBP25.5■■□□□ 1.67
VPS16-201ENST00000380443 NAA30Q147X3 362 aaPredicted RBP25.5■■□□□ 1.67
VPS16-201ENST00000380443 ELF2Q15723 593 aa25.5■■□□□ 1.67
VPS16-201ENST00000380443 APOBEC3FQ8IUX4 373 aaKnown RBP25.5■■□□□ 1.67
VPS16-201ENST00000380443 NELFCDQ8IXH7 590 aa25.5■■□□□ 1.67
VPS16-201ENST00000380443 SYN2Q92777 582 aaPredicted RBP25.5■■□□□ 1.67
VPS16-201ENST00000380443 DYDC2Q96IM9 177 aa25.5■■□□□ 1.67
VPS16-201ENST00000380443 CARD6Q9BX69 1037 aa25.5■■□□□ 1.67
VPS16-201ENST00000380443 RGL1Q9NZL6 768 aa25.5■■□□□ 1.67
VPS16-201ENST00000380443 REXO2Q9Y3B8 237 aaKnown RBP25.5■■□□□ 1.67
VPS16-201ENST00000380443 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.5■■□□□ 1.678e-6■■■■□ 20.4
VPS16-201ENST00000380443 UBE4BO95155 1302 aa25.5■■□□□ 1.67
VPS16-201ENST00000380443 FRMPD4Q14CM0 1322 aa25.5■■□□□ 1.67
VPS16-201ENST00000380443 IPO5O00410 1097 aaKnown RBP25.49■■□□□ 1.67
VPS16-201ENST00000380443 KRT86O43790 486 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 CACNB1Q02641 598 aaPredicted RBP25.49■■□□□ 1.67
VPS16-201ENST00000380443 NFIL3Q16649 462 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 PCNX4Q63HM2 1172 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 STXBP4Q6ZWJ1 553 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 TPH2Q8IWU9 490 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 TXLNBQ8N3L3 684 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 CEP112Q8N8E3 955 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 NAPGQ99747 312 aaPredicted RBP25.49■■□□□ 1.67
VPS16-201ENST00000380443 FGFBP2Q9BYJ0 223 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 TSGA10Q9BZW7 698 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 TANGO6Q9C0B7 1094 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 MAF1Q9H063 256 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 TYW1Q9NV66 732 aaKnown RBP25.49■■□□□ 1.67
VPS16-201ENST00000380443 CDC23Q9UJX2 597 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 ODF2LQ9ULJ1 636 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 CTDP1Q9Y5B0 961 aaPredicted RBP25.49■■□□□ 1.67
VPS16-201ENST00000380443 LOXHD1Q8IVV2 1947 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 C1orf186Q6ZWK4 172 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 CCDC42Q96M95 316 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 METTL14Q9HCE5 456 aaKnown RBP25.49■■□□□ 1.67
VPS16-201ENST00000380443 GJA3Q9Y6H8 435 aa25.49■■□□□ 1.67
VPS16-201ENST00000380443 SLC16A3O15427 465 aaKnown RBP25.48■■□□□ 1.67
VPS16-201ENST00000380443 FAM13AO94988 1023 aa25.48■■□□□ 1.67
VPS16-201ENST00000380443 ARP10275 920 aa25.48■■□□□ 1.67
VPS16-201ENST00000380443 RAD51AP2Q09MP3 1159 aa25.48■■□□□ 1.67
VPS16-201ENST00000380443 CTTNQ14247 550 aaKnown RBP25.48■■□□□ 1.67
VPS16-201ENST00000380443 ERCC6LQ2NKX8 1250 aa25.48■■□□□ 1.67
VPS16-201ENST00000380443 RUSC1Q9BVN2 902 aa25.48■■□□□ 1.67
VPS16-201ENST00000380443 CEP72Q9P209 647 aa25.48■■□□□ 1.67
VPS16-201ENST00000380443 NR2F2P24468 414 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 SPA17Q15506 151 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 XRRA1Q6P2D8 792 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 SCYL3Q8IZE3 742 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 IRX2Q9BZI1 471 aaPredicted RBP25.47■■□□□ 1.67
VPS16-201ENST00000380443 UNC45AQ9H3U1 944 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 UBIAD1Q9Y5Z9 338 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 EGFRP00533 1210 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 HERVK_113P62684 666 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 SAMD7Q7Z3H4 446 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 KIAA1328Q86T90 577 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 SLC35F6Q8N357 371 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 L3MBTL3Q96JM7 780 aaPredicted RBP25.47■■□□□ 1.67
VPS16-201ENST00000380443 FAM207AQ9NSI2 230 aaPredicted RBP25.47■■□□□ 1.67
VPS16-201ENST00000380443 PPP2R3BQ9Y5P8 575 aa25.47■■□□□ 1.67
VPS16-201ENST00000380443 NKRFO15226 690 aaKnown RBP eCLIP25.46■■□□□ 1.67
VPS16-201ENST00000380443 FLOT1O75955 427 aa25.46■■□□□ 1.67
VPS16-201ENST00000380443 LCA5LO95447 670 aa25.46■■□□□ 1.67
VPS16-201ENST00000380443 VCAM1P19320 739 aa25.46■■□□□ 1.67
VPS16-201ENST00000380443 ZNF131P52739 623 aa25.46■■□□□ 1.67
VPS16-201ENST00000380443 TBC1D10BQ4KMP7 808 aaPredicted RBP25.46■■□□□ 1.67
VPS16-201ENST00000380443 SAMD1Q6SPF0 538 aaPredicted RBP25.46■■□□□ 1.67
VPS16-201ENST00000380443 CACNA2D4Q7Z3S7 1137 aa25.46■■□□□ 1.67
VPS16-201ENST00000380443 PARVGQ9HBI0 331 aa25.46■■□□□ 1.67
VPS16-201ENST00000380443 JADE2Q9NQC1 790 aa25.46■■□□□ 1.67
VPS16-201ENST00000380443 TBC1D22BQ9NU19 505 aa25.46■■□□□ 1.67
VPS16-201ENST00000380443 ARGLU1Q9NWB6 273 aaPredicted RBP25.46■■□□□ 1.67
VPS16-201ENST00000380443 WDR90Q96KV7 1748 aa25.46■■□□□ 1.67
VPS16-201ENST00000380443 DOCK1Q14185 1865 aa25.45■■□□□ 1.67
VPS16-201ENST00000380443 SSU72P8A0A1W2PR75 194 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 IQCA1LA6NCM1 817 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 ALAS1P13196 640 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 GUCY2CP25092 1073 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 UBXN2AP68543 259 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 KCNMA1Q12791 1236 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 PDXDC1Q6P996 788 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 SYTL5Q8TDW5 730 aaPredicted RBP25.45■■□□□ 1.66
VPS16-201ENST00000380443 BAP1Q92560 729 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 C12orf42Q96LP6 360 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 RRAGCQ9HB90 399 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 NMRK2Q9NPI5 230 aa25.45■■□□□ 1.66
VPS16-201ENST00000380443 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.45■■□□□ 1.66
VPS16-201ENST00000380443 V9GYY5 206 aaPredicted RBP25.45■■□□□ 1.66
VPS16-201ENST00000380443 NFIBO00712 420 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 CHMP2AO43633 222 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 VAV2P52735 878 aa25.44■■□□□ 1.66
VPS16-201ENST00000380443 OAZ1P54368 228 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms