RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 COPS5Q92905 334 aa10.05□□□□□ -0.8
PMS2-202ENST00000380416 PDCD2LQ9BRP1 358 aa10.05□□□□□ -0.8
PMS2-202ENST00000380416 UPF3BQ9BZI7 483 aaKnown RBP10.05□□□□□ -0.8
PMS2-202ENST00000380416 IRF2BPLQ9H1B7 796 aa10.05□□□□□ -0.8
PMS2-202ENST00000380416 RBM28Q9NW13 759 aaKnown RBP10.05□□□□□ -0.8
PMS2-202ENST00000380416 PPP4R2Q9NY27 417 aa10.05□□□□□ -0.8
PMS2-202ENST00000380416 MRVI1Q9Y6F6 885 aa10.05□□□□□ -0.8
PMS2-202ENST00000380416 GVINP1Q7Z2Y8 2422 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 C3orf80F5H4A9 247 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 ZBTB43O43298 467 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 KPNA6O60684 536 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 HSPA4P34932 840 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 PSMC6P62333 389 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 COL9A3Q14050 684 aaPredicted RBP10.04□□□□□ -0.8
PMS2-202ENST00000380416 PGM5Q15124 567 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 RTN1Q16799 776 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 LY6KQ17RY6 165 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 ADCK5Q3MIX3 580 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 KCNV1Q6PIU1 500 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 APOA5Q6Q788 366 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 TMTC3Q6ZXV5 915 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 RPUSD2Q8IZ73 545 aaKnown RBP10.04□□□□□ -0.8
PMS2-202ENST00000380416 SRBD1Q8N5C6 995 aaKnown RBP10.04□□□□□ -0.8
PMS2-202ENST00000380416 FANCBQ8NB91 859 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 SMARCC2Q8TAQ2 1214 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 ATOH1Q92858 354 aaPredicted RBP10.04□□□□□ -0.8
PMS2-202ENST00000380416 TCEANC2Q96MN5 208 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 JAKMIP1Q96N16 626 aaKnown RBP10.04□□□□□ -0.8
PMS2-202ENST00000380416 SLC9A7Q96T83 725 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 MTG1Q9BT17 334 aaPredicted RBP10.04□□□□□ -0.8
PMS2-202ENST00000380416 NOC4LQ9BVI4 516 aaKnown RBP10.04□□□□□ -0.8
PMS2-202ENST00000380416 MUTYHQ9UIF7 546 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 NAP1L2Q9ULW6 460 aaPredicted RBP10.04□□□□□ -0.8
PMS2-202ENST00000380416 SCN5AQ14524 2016 aa10.04□□□□□ -0.8
PMS2-202ENST00000380416 NCOR2Q9Y618 2525 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 CHD8Q9HCK8 2581 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 A6NJR5 290 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 GOLGA8AA7E2F4 631 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 GOLGA8BA8MQT2 603 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 PFKMP08237 780 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 MMP3P08254 477 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 PSMA5P28066 241 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 CCL23P55773 120 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 EXOSC10Q01780 885 aaKnown RBP10.03□□□□□ -0.8
PMS2-202ENST00000380416 GNPTABQ3T906 1256 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 FAM47CQ5HY64 1035 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 CCDC62Q6P9F0 684 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 BLOC1S2Q6QNY1 142 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 VSIG10LQ86VR7 867 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 SUGP1Q8IWZ8 645 aaKnown RBP10.03□□□□□ -0.8
PMS2-202ENST00000380416 CMTR1Q8N1G2 835 aaKnown RBP10.03□□□□□ -0.8
PMS2-202ENST00000380416 CCDC82Q8N4S0 544 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 SLC43A3Q8NBI5 491 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 PHOSPHO2Q8TCD6 241 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 AFG1LQ8WV93 481 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 EDAQ92838 391 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 COL26A1Q96A83 441 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 PBXIP1Q96AQ6 731 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 CNTNAP3BQ96NU0 1288 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 CNTNAP3Q9BZ76 1288 aa10.03□□□□□ -0.8
PMS2-202ENST00000380416 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
PMS2-202ENST00000380416 TANC1Q9C0D5 1861 aa10.02□□□□□ -0.8
PMS2-202ENST00000380416 TPRP12270 2363 aaKnown RBP10.02□□□□□ -0.8
PMS2-202ENST00000380416 CHD6Q8TD26 2715 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 TMEM221A6NGB7 291 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 M0R296 226 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 STAM2O75886 525 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 SUPT20HL2P0C7V6 817 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 CASTP20810 708 aaKnown RBP10.02□□□□□ -0.81
PMS2-202ENST00000380416 RCAN1P53805 252 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 CHMP4BP1P59074 171 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 ARHGAP1Q07960 439 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 LAMC2Q13753 1193 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 DGKDQ16760 1214 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 HEATR3Q7Z4Q2 680 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 HERC6Q8IVU3 1022 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 DHX37Q8IY37 1157 aaKnown RBP10.02□□□□□ -0.81
PMS2-202ENST00000380416 FBXL6Q8N531 539 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 IL31RAQ8NI17 732 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 NLRP7Q8WX94 980 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 KCNB2Q92953 911 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 EMID1Q96A84 441 aaPredicted RBP10.02□□□□□ -0.81
PMS2-202ENST00000380416 ALDH8A1Q9H2A2 487 aaPredicted RBP10.02□□□□□ -0.81
PMS2-202ENST00000380416 PSTPIP2Q9H939 334 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 SNX14Q9Y5W7 946 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 GRIN2DO15399 1336 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 FRMPD4Q14CM0 1322 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 CNTNAP5Q8WYK1 1306 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 DOCK5Q9H7D0 1870 aa10.02□□□□□ -0.81
PMS2-202ENST00000380416 CCDC196A0A1B0GTZ2 297 aa10.01□□□□□ -0.81
PMS2-202ENST00000380416 hCG_1642624A0A1W2PR95 340 aa10.01□□□□□ -0.81
PMS2-202ENST00000380416 H3BQ06 376 aaPredicted RBP10.01□□□□□ -0.81
PMS2-202ENST00000380416 PIK3CDO00329 1044 aa10.01□□□□□ -0.81
PMS2-202ENST00000380416 EPB41L2O43491 1005 aaKnown RBP10.01□□□□□ -0.81
PMS2-202ENST00000380416 B4GALT4O60513 344 aa10.01□□□□□ -0.81
PMS2-202ENST00000380416 UBA1P22314 1058 aaKnown RBP10.01□□□□□ -0.81
PMS2-202ENST00000380416 METAP2P50579 478 aaKnown RBP eCLIP10.01□□□□□ -0.81
PMS2-202ENST00000380416 PTPN11Q06124 597 aaPredicted RBP10.01□□□□□ -0.81
PMS2-202ENST00000380416 NBPF20Q3BBV1 942 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms