RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 KRT26Q7Z3Y9 468 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 TRERF1Q96PN7 1200 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 NUP58Q9BVL2 599 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 MMRN2Q9H8L6 949 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 L2HGDHQ9H9P8 463 aa13.28□□□□□ -0.28
USP3-202ENST00000380324 MYCLP12524 364 aaPredicted RBP13.27□□□□□ -0.28
USP3-202ENST00000380324 LMNB1P20700 586 aa13.27□□□□□ -0.28
USP3-202ENST00000380324 NR2F2P24468 414 aa13.27□□□□□ -0.28
USP3-202ENST00000380324 CASQ1P31415 396 aa13.27□□□□□ -0.28
USP3-202ENST00000380324 HIRAP54198 1017 aaPredicted RBP13.27□□□□□ -0.28
USP3-202ENST00000380324 MTMR1Q13613 665 aa13.27□□□□□ -0.28
USP3-202ENST00000380324 DLK2Q6UY11 383 aa13.27□□□□□ -0.28
USP3-202ENST00000380324 GPC2Q8N158 579 aa13.27□□□□□ -0.28
USP3-202ENST00000380324 RETREG2Q8NC44 543 aa13.27□□□□□ -0.28
USP3-202ENST00000380324 SMCR8Q8TEV9 937 aaPredicted RBP13.27□□□□□ -0.28
USP3-202ENST00000380324 TAAR1Q96RJ0 339 aa13.27□□□□□ -0.28
USP3-202ENST00000380324 SAMM50Q9Y512 469 aa13.27□□□□□ -0.28
USP3-202ENST00000380324 RIPK3Q9Y572 518 aa13.27□□□□□ -0.28
USP3-202ENST00000380324 FAM13AO94988 1023 aa13.27□□□□□ -0.29
USP3-202ENST00000380324 NDUFA10O95299 355 aa13.27□□□□□ -0.29
USP3-202ENST00000380324 ABL1P00519 1130 aa13.27□□□□□ -0.29
USP3-202ENST00000380324 MRPS9P82933 396 aaKnown RBP13.27□□□□□ -0.29
USP3-202ENST00000380324 TKFCQ3LXA3 575 aa13.27□□□□□ -0.29
USP3-202ENST00000380324 RNF207Q6ZRF8 634 aa13.27□□□□□ -0.29
USP3-202ENST00000380324 RNF146Q9NTX7 359 aa13.27□□□□□ -0.29
USP3-202ENST00000380324 ZNF112Q9UJU3 913 aa13.27□□□□□ -0.29
USP3-202ENST00000380324 SIK3Q9Y2K2 1263 aa13.27□□□□□ -0.29
USP3-202ENST00000380324 KIAA1217Q5T5P2 1943 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 ZBED6P86452 979 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 KCNA1Q09470 495 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 ADAM9Q13443 819 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 PCNX4Q63HM2 1172 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 SNRNP48Q6IEG0 339 aaKnown RBP13.26□□□□□ -0.29
USP3-202ENST00000380324 FOXR2Q6PJQ5 311 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 MIER3Q7Z3K6 550 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 KLRG1Q96E93 195 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 RMDN3Q96TC7 470 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 ZNHIT6Q9NWK9 470 aaKnown RBP13.26□□□□□ -0.29
USP3-202ENST00000380324 EPN1Q9Y6I3 576 aaPredicted RBP13.26□□□□□ -0.29
USP3-202ENST00000380324 WDR90Q96KV7 1748 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
USP3-202ENST00000380324 TESPA1A2RU30 521 aaPredicted RBP13.25□□□□□ -0.29
USP3-202ENST00000380324 KIF5CO60282 957 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 HOXD13P35453 343 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 ITGB3BPQ13352 177 aaPredicted RBP13.25□□□□□ -0.29
USP3-202ENST00000380324 PGM5Q15124 567 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 ELF2Q15723 593 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 KNOP1Q1ED39 458 aaKnown RBP13.25□□□□□ -0.29
USP3-202ENST00000380324 TRMT1LQ7Z2T5 733 aaKnown RBP13.25□□□□□ -0.29
USP3-202ENST00000380324 MYCT1Q8N699 235 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 ZNF397Q8NF99 534 aaPredicted RBP13.25□□□□□ -0.29
USP3-202ENST00000380324 ERO1AQ96HE7 468 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 CEP63Q96MT8 703 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 RIT2Q99578 217 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 TFR2Q9UP52 801 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 REXO2Q9Y3B8 237 aaKnown RBP13.25□□□□□ -0.29
USP3-202ENST00000380324 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 EPHA7Q15375 998 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 MEA1Q16626 185 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 B3GNT9Q6UX72 402 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 C1orf186Q6ZWK4 172 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 EPM2AIP1Q7L775 607 aaPredicted RBP13.25□□□□□ -0.29
USP3-202ENST00000380324 UPF1Q92900 1129 aaKnown RBP eCLIP13.25□□□□□ -0.29
USP3-202ENST00000380324 AGO4Q9HCK5 861 aaKnown RBP13.25□□□□□ -0.29
USP3-202ENST00000380324 TRIM10Q9UDY6 481 aa13.25□□□□□ -0.29
USP3-202ENST00000380324 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.25□□□□□ -0.29
USP3-202ENST00000380324 OTOFQ9HC10 1997 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 A0A1W2PQJ5 194 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 CETN3O15182 167 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 DDNO94850 711 aaPredicted RBP13.24□□□□□ -0.29
USP3-202ENST00000380324 BCRP11274 1271 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 NMT1P30419 496 aaKnown RBP13.24□□□□□ -0.29
USP3-202ENST00000380324 GHRHRQ02643 423 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 HSP90AA2PQ14568 343 aaPredicted RBP13.24□□□□□ -0.29
USP3-202ENST00000380324 EDRF1Q3B7T1 1238 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 FIGNQ5HY92 759 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 ZNF569Q5MCW4 686 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 ARHGEF16Q5VV41 709 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 ANKRD7Q92527 254 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 NACC1Q96RE7 527 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 CRACR2AQ9BSW2 395 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 IKZF4Q9H2S9 585 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 PARVGQ9HBI0 331 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 PXMP2Q9NR77 195 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 UBIAD1Q9Y5Z9 338 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 PTPRFP10586 1907 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 ASTN1O14525 1302 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 ARHGEF35A5YM69 484 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 GNA14O95837 355 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 PLEKP08567 350 aaPredicted RBP13.24□□□□□ -0.29
USP3-202ENST00000380324 BAATQ14032 418 aaPredicted RBP13.24□□□□□ -0.29
USP3-202ENST00000380324 PLS1Q14651 629 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 ZC2HC1CQ53FD0 456 aaPredicted RBP13.24□□□□□ -0.29
USP3-202ENST00000380324 MAEAQ7L5Y9 396 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 TRIM59Q8IWR1 403 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 SH2D3AQ9BRG2 576 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 FHDC1Q9C0D6 1143 aaPredicted RBP13.24□□□□□ -0.29
USP3-202ENST00000380324 NHEJ1Q9H9Q4 299 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms