RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.26□□□□□ -0.29
HERC6-203ENST00000380265 ZMYND12Q9H0C1 365 aa13.26□□□□□ -0.29
HERC6-203ENST00000380265 KCNK9Q9NPC2 374 aa13.26□□□□□ -0.29
HERC6-203ENST00000380265 FAM114A2Q9NRY5 505 aa13.26□□□□□ -0.29
HERC6-203ENST00000380265 DISP2A7MBM2 1401 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 GOLGA6L10A0A0M3HER8 536 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 SMCO2A6NFE2 343 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 C5orf60A6NFR6 353 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 POTEMA6NI47 508 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
HERC6-203ENST00000380265 EVI5O60447 810 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 ECHS1P30084 290 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 DCAF17Q5H9S7 520 aaPredicted RBP13.25□□□□□ -0.29
HERC6-203ENST00000380265 GUF1Q8N442 669 aaKnown RBP13.25□□□□□ -0.29
HERC6-203ENST00000380265 DDX12PQ92771 950 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 CRNKL1Q9BZJ0 848 aaKnown RBP13.25□□□□□ -0.29
HERC6-203ENST00000380265 BATF3Q9NR55 127 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 ANAPC4Q9UJX5 808 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 EME2A4GXA9 379 aaPredicted RBP13.25□□□□□ -0.29
HERC6-203ENST00000380265 ABCB4P21439 1286 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 PTK2Q05397 1052 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 CHRNDQ07001 517 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 KRT79Q5XKE5 535 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 NEK8Q86SG6 692 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 VPS36Q86VN1 386 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 NEK9Q8TD19 979 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
HERC6-203ENST00000380265 MYH6P13533 1939 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 CCDC169A6NNP5 214 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 CCDC188H7C350 402 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 LAD1O00515 517 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 RTN2O75298 545 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 IFI35P80217 286 aaPredicted RBP13.25□□□□□ -0.29
HERC6-203ENST00000380265 ATP11AP98196 1134 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 SPICE1Q8N0Z3 855 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 TBCKQ8TEA7 893 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 UBA5Q9GZZ9 404 aa13.25□□□□□ -0.29
HERC6-203ENST00000380265 A8MUI8 341 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 KIF3CO14782 793 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 ALDH5A1P51649 535 aaPredicted RBP13.24□□□□□ -0.29
HERC6-203ENST00000380265 TAF11Q15544 211 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 CAVIN4Q5BKX8 364 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 CCHCR1Q8TD31 782 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 RAB17Q9H0T7 212 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 ZBTB1Q9Y2K1 713 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 CFAP73A6NFT4 308 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 MPHOSPH10O00566 681 aaKnown RBP13.24□□□□□ -0.29
HERC6-203ENST00000380265 EIF3BP55884 814 aaKnown RBP13.24□□□□□ -0.29
HERC6-203ENST00000380265 ZNF211Q13398 564 aaPredicted RBP13.24□□□□□ -0.29
HERC6-203ENST00000380265 CALCRLQ16602 461 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 RNF217Q8TC41 542 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 PARD3BQ8TEW8 1205 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 C6orf50Q9HD87 102 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 CPSF2Q9P2I0 782 aaKnown RBP13.24□□□□□ -0.29
HERC6-203ENST00000380265 DAAM1Q9Y4D1 1078 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 LMTK3Q96Q04 1460 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 USP17L3A6NCW0 530 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 USP17L4A6NCW7 530 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 WTIPA6NIX2 430 aaPredicted RBP13.24□□□□□ -0.29
HERC6-203ENST00000380265 CLSTN1O94985 981 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 H2AFZP0C0S5 128 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 TSPY3P0CV98 308 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 TSPY8P0CW00 308 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 NQO1P15559 274 aaKnown RBP13.24□□□□□ -0.29
HERC6-203ENST00000380265 PCK1P35558 622 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 GNAQP50148 359 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 EVA1CP58658 441 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 FAM26FQ5R3K3 315 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 H2AFVQ71UI9 128 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 USP17L1Q7RTZ2 530 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 KRT25Q7Z3Z0 450 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
HERC6-203ENST00000380265 SCFD2Q8WU76 684 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 GLG1Q92896 1179 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 EDEM3Q9BZQ6 932 aa13.24□□□□□ -0.29
HERC6-203ENST00000380265 SEC63Q9UGP8 760 aaKnown RBP13.24□□□□□ -0.29
HERC6-203ENST00000380265 MYH7P12883 1935 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 FLT1P17948 1338 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 FLOT1O75955 427 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 PMS2P54278 862 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 ADCY1Q08828 1119 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 GNPTABQ3T906 1256 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 HERC4Q5GLZ8 1057 aaPredicted RBP13.23□□□□□ -0.29
HERC6-203ENST00000380265 KSR1Q8IVT5 923 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 DYNLL2Q96FJ2 89 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 RIOK1Q9BRS2 568 aaKnown RBP13.23□□□□□ -0.29
HERC6-203ENST00000380265 AMFRQ9UKV5 643 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 AGAP1Q9UPQ3 857 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 TNS3Q68CZ2 1445 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 DR1Q01658 176 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 NUGGCQ68CJ6 796 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 LRRC55Q6ZSA7 311 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 BRIP1Q9BX63 1249 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 RAB34Q9BZG1 259 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 DBR1Q9UK59 544 aaKnown RBP13.23□□□□□ -0.29
HERC6-203ENST00000380265 USP17L8P0C7I0 530 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 ATF3P18847 181 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 ADAM9Q13443 819 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 SLC29A2Q14542 456 aa13.23□□□□□ -0.29
HERC6-203ENST00000380265 CCDC152Q4G0S7 254 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms