RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 KCNH2Q12809 1159 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 EDRF1Q3B7T1 1238 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 SFR1Q86XK3 245 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 RNF10Q8N5U6 811 aaKnown RBP21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 REEP2Q9BRK0 252 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 FAM86B1E9PN63 330 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 SLC26A4O43511 780 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 PALMO75781 387 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 FAM86B2P0C5J1 330 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 ACTN1P12814 892 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 ICA1Q05084 483 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 SND1Q7KZF4 910 aaKnown RBP eCLIP21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 AFAP1L1Q8TED9 768 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 BCAS3Q9H6U6 928 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 SLC18A3Q16572 532 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 DPY19L2P1Q6NXN4 242 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 LEKR1Q6ZMV7 388 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 HDAC9Q9UKV0 1011 aa21.47■■□□□ 1.03
SHROOM1-202ENST00000378676 CETN3O15182 167 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 FTCDO95954 541 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 MYBP10242 640 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 DNA2P51530 1060 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 NAB2Q15742 525 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 FOXR1Q6PIV2 292 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 F5H6K3 240 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 PLSCR1O15162 318 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 EPS15P42566 896 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 JAG1P78504 1218 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 KLRC3Q07444 240 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 ASIC2Q16515 512 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 Q4G0T1 1027 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 PPP4R3CPQ6ZMV5 832 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 AMNQ9BXJ7 453 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 PI4KBQ9UBF8 816 aa21.46■■□□□ 1.03
SHROOM1-202ENST00000378676 RSPH10B2B2RC85 870 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 OPLAHO14841 1288 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 NDUFB10O96000 172 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 RSPH10BP0C881 870 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 PAFAH1B1P43034 410 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 RBM5P52756 815 aaKnown RBP eCLIP21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 KLHL30Q0D2K2 578 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 TATDN1Q6P1N9 297 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 EPM2AIP1Q7L775 607 aaPredicted RBP21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 SYT2Q8N9I0 419 aaPredicted RBP21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 RUBCNQ92622 972 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 TRIM34Q9BYJ4 488 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 POLD4Q9HCU8 107 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 AIPL1Q9NZN9 384 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 STIM2Q9P246 746 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 PACSIN2Q9UNF0 486 aaPredicted RBP21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 SLC9A1P19634 815 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 RPA1P27694 616 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 C8orf74Q6P047 294 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 FBXO11Q86XK2 927 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 IDI2Q9BXS1 227 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 ADAMTS1Q9UHI8 967 aa21.45■■□□□ 1.02
SHROOM1-202ENST00000378676 GOLGA6BA6NDN3 693 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 RPS6KA5O75582 802 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 SREBF1P36956 1147 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 CYP4A11Q02928 519 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 TRAF3IP3Q9Y228 551 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 MSH4O15457 936 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 HOXA13P31271 388 aaPredicted RBP21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 LRRC31Q6UY01 552 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 TSEN2Q8NCE0 465 aaKnown RBP21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 ERMNQ8TAM6 284 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 CYP2W1Q8TAV3 490 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 TSKSQ9UJT2 592 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 VAV3Q9UKW4 847 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 DNM3Q9UQ16 869 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 PCDHGC5Q9Y5F6 944 aa21.44■■□□□ 1.02
SHROOM1-202ENST00000378676 TBX3O15119 743 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 ALDH1B1P30837 517 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 IKQ13123 557 aaPredicted RBP21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 KNOP1Q1ED39 458 aaKnown RBP21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 KIAA0753Q2KHM9 967 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 SYDE2Q5VT97 1194 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 TMEM179Q6ZVK1 233 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 RUSC1Q9BVN2 902 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 ASTN1O14525 1302 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 SPDYE3A6NKU9 549 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 APBA3O96018 575 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 DACT2Q5SW24 774 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 MEI1Q5TIA1 1274 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 PODNQ7Z5L7 613 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 COL23A1Q86Y22 540 aaPredicted RBP21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 GMCL1P1Q8NEA9 526 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 RGS17Q9UGC6 210 aaPredicted RBP21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 LCMT1Q9UIC8 334 aa21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 AJAP1Q9UKB5 411 aaPredicted RBP21.43■■□□□ 1.02
SHROOM1-202ENST00000378676 MYH11P35749 1972 aa21.42■■□□□ 1.02
SHROOM1-202ENST00000378676 GRID2IPA4D2P6 1211 aa21.42■■□□□ 1.02
SHROOM1-202ENST00000378676 MMP14P50281 582 aa21.42■■□□□ 1.02
SHROOM1-202ENST00000378676 ABCB5Q2M3G0 1257 aa21.42■■□□□ 1.02
SHROOM1-202ENST00000378676 CFAP221Q4G0U5 840 aa21.42■■□□□ 1.02
SHROOM1-202ENST00000378676 SLC30A10Q6XR72 485 aa21.42■■□□□ 1.02
SHROOM1-202ENST00000378676 FRMD5Q7Z6J6 570 aa21.42■■□□□ 1.02
SHROOM1-202ENST00000378676 DNAAF5Q86Y56 855 aa21.42■■□□□ 1.02
SHROOM1-202ENST00000378676 LUC7LQ9NQ29 371 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms