RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 MGARPQ8TDB4 240 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 H0YCG3 227 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 GCLMP48507 274 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 TFAMQ00059 246 aaKnown RBP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 ZSCAN26Q16670 478 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 DENND2CQ68D51 928 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 PADI6Q6TGC4 694 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 APBB1IPQ7Z5R6 666 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 HDAC6Q9UBN7 1215 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 TCRBV5S4A2TA0A5A2 114 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 SUGT1Q9Y2Z0 365 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 BCL9O00512 1426 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 DCCP43146 1447 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 SNRNP48Q6IEG0 339 aaKnown RBP14.35□□□□□ -0.11
NPHP4-203ENST00000378169 PRPF38AQ8NAV1 312 aaKnown RBP14.35□□□□□ -0.11
NPHP4-203ENST00000378169 IPO4Q8TEX9 1081 aaKnown RBP14.35□□□□□ -0.11
NPHP4-203ENST00000378169 RNF34Q969K3 372 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 TSNARE1Q96NA8 513 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 NXF1Q9UBU9 619 aaKnown RBP14.35□□□□□ -0.11
NPHP4-203ENST00000378169 PCDHB4Q9Y5E5 795 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 TBC1D8O95759 1140 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 SRGAP2CP0DJJ0 459 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 KRT15P19012 456 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 ADCY8P40145 1251 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 RASA3Q14644 834 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 PPP2R5DQ14738 602 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 SLC10A5Q5PT55 438 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 APOL6Q9BWW8 343 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 RNF146Q9NTX7 359 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 SERPINA10Q9UK55 444 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 MYO3BQ8WXR4 1341 aa14.35□□□□□ -0.11
NPHP4-203ENST00000378169 AP5Z1O43299 807 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 TNNC2P02585 160 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 PRELPP51888 382 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 MAP3K9P80192 1104 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 SEC23AQ15436 765 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 KNOP1Q1ED39 458 aaKnown RBP14.34□□□□□ -0.11
NPHP4-203ENST00000378169 PPP1R18Q6NYC8 613 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 ZBTB33Q86T24 672 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 LDHDQ86WU2 507 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 ADSSL1Q8N142 457 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 CDHR1Q96JP9 859 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 ADPGKQ9BRR6 497 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 AP1M1Q9BXS5 423 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 ADD3Q9UEY8 706 aaKnown RBP14.34□□□□□ -0.11
NPHP4-203ENST00000378169 DAPK3O43293 454 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 GNGT1P63211 74 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 DPP9Q86TI2 863 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 SESTD1Q86VW0 696 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 CERKQ8TCT0 537 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 JMJD4Q9H9V9 463 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 ABCB6Q9NP58 842 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 FAM169AQ9Y6X4 670 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 SPATA31A6Q5VVP1 1343 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 K7ERI5 159 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 SLC16A4O15374 487 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 TRIM49P0CI25 452 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 TRIM49CP0CI26 452 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 CD58P19256 250 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 CCND2P30279 289 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 MXRA7P84157 204 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 PRAMEF18Q5VWM3 479 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 BSPRYQ5W0U4 402 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 ANKRD42Q8N9B4 389 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 GIMAP7Q8NHV1 300 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 CABS1Q96KC9 395 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 EIF2AK1Q9BQI3 630 aaKnown RBP14.34□□□□□ -0.11
NPHP4-203ENST00000378169 ZMYND12Q9H0C1 365 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 FEZ2Q9UHY8 353 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-203ENST00000378169 HERC5Q9UII4 1024 aaKnown RBP14.34□□□□□ -0.11
NPHP4-203ENST00000378169 DNAJC12Q9UKB3 198 aa14.34□□□□□ -0.11
NPHP4-203ENST00000378169 A0A1B0GTH6 734 aa14.33□□□□□ -0.11
NPHP4-203ENST00000378169 MYMKA6NI61 221 aa14.33□□□□□ -0.11
NPHP4-203ENST00000378169 RGS16O15492 202 aaPredicted RBP14.33□□□□□ -0.11
NPHP4-203ENST00000378169 PPP4CP60510 307 aa14.33□□□□□ -0.11
NPHP4-203ENST00000378169 CEP57Q86XR8 500 aa14.33□□□□□ -0.11
NPHP4-203ENST00000378169 AGPAT5Q9NUQ2 364 aa14.33□□□□□ -0.11
NPHP4-203ENST00000378169 FAN1Q9Y2M0 1017 aa14.33□□□□□ -0.11
NPHP4-203ENST00000378169 USP11P51784 963 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 KCNB1Q14721 858 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 PPP2R5AQ15172 486 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 FAM160B1Q5W0V3 765 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 RASGRP2Q7LDG7 609 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 PTF1AQ7RTS3 328 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 CCDC89Q8N998 374 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 ZNF668Q96K58 619 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-203ENST00000378169 LXNQ9BS40 222 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 VPS37BQ9H9H4 285 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 IFT172Q9UG01 1749 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 PNMA6AP0CW24 399 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-203ENST00000378169 MTMR3Q13615 1198 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 Q3C1V9 767 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 CEP55Q53EZ4 464 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 MIS18BP1Q6P0N0 1132 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 PROM2Q8N271 834 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 NLRP4Q96MN2 994 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 FUCA2Q9BTY2 467 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 MAD2L2Q9UI95 211 aa14.33□□□□□ -0.12
NPHP4-203ENST00000378169 ZNF148Q9UQR1 794 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms