RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 KCNJ2P63252 427 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 FKBP3Q00688 224 aaKnown RBP17.32■□□□□ 0.36
CKAP4-201ENST00000378026 SEMA3FQ13275 785 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 NBPF9Q3BBW0 867 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 ZNF571Q7Z3V5 609 aaPredicted RBP17.32■□□□□ 0.36
CKAP4-201ENST00000378026 SNX29Q8TEQ0 813 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 AGAP11Q8TF27 550 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 FAM129AQ9BZQ8 928 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 ABCF3Q9NUQ8 709 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 PAEPP09466 180 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 CYP19A1P11511 503 aaPredicted RBP17.32■□□□□ 0.36
CKAP4-201ENST00000378026 IFI35P80217 286 aaPredicted RBP17.32■□□□□ 0.36
CKAP4-201ENST00000378026 MECOMQ03112 1051 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 CCDC152Q4G0S7 254 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 PBKQ96KB5 322 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 CRNKL1Q9BZJ0 848 aaKnown RBP17.32■□□□□ 0.36
CKAP4-201ENST00000378026 MKNK2Q9HBH9 465 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 AGAP1Q9UPQ3 857 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 STK38LQ9Y2H1 464 aa17.32■□□□□ 0.36
CKAP4-201ENST00000378026 DIAPH2O60879 1101 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 KIF2BQ8N4N8 673 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 SLC44A5Q8NCS7 719 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 MICAL1Q8TDZ2 1067 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 FMO2Q99518 471 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 AZI2Q9H6S1 392 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 SAMD15Q9P1V8 674 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 SPDYE3A6NKU9 549 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 GHRP10912 638 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 TAX1BP1Q86VP1 789 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 CCDC26Q8TAB7 109 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 ACTRT1Q8TDG2 376 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 EDEM3Q9BZQ6 932 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 NUCKS1Q9H1E3 243 aaKnown RBP17.31■□□□□ 0.36
CKAP4-201ENST00000378026 KIF9Q9HAQ2 790 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 DOCK2Q92608 1830 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 KIF13AQ9H1H9 1805 aa17.31■□□□□ 0.36
CKAP4-201ENST00000378026 FGGP02679 453 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 SLC9A1P19634 815 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 PRDX5P30044 214 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 CALCRLQ16602 461 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 CCDC38Q502W7 563 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 UBAP2Q5T6F2 1119 aaKnown RBP17.3■□□□□ 0.36
CKAP4-201ENST00000378026 ALKBH5Q6P6C2 394 aaKnown RBP17.3■□□□□ 0.36
CKAP4-201ENST00000378026 ZNF34Q8IZ26 560 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 MGARPQ8TDB4 240 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.3■□□□□ 0.36
CKAP4-201ENST00000378026 A8MUI8 341 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 KLRF2D3W0D1 207 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 UPP2O95045 317 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 PLTPP55058 493 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 EVA1CP58658 441 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 CAVIN4Q5BKX8 364 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 TNS2Q63HR2 1409 aa17.3■□□□□ 0.36
CKAP4-201ENST00000378026 PVALEFA0A1B0GWK0 134 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 PCP11498 1178 aaKnown RBP17.29■□□□□ 0.36
CKAP4-201ENST00000378026 MAEAQ7L5Y9 396 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 KRT25Q7Z3Z0 450 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 GLG1Q92896 1179 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 ZNF317Q96PQ6 595 aaPredicted RBP17.29■□□□□ 0.36
CKAP4-201ENST00000378026 INTS9Q9NV88 658 aaKnown RBP17.29■□□□□ 0.36
CKAP4-201ENST00000378026 C15orf41Q9Y2V0 281 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 NPHP3-ACAD11A0A0J9YXS1 232 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 ENO4A6NNW6 628 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 TDP2O95551 362 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 TSPY3P0CV98 308 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 TSPY8P0CW00 308 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 KLRK1P26718 216 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 LRRC14Q15048 493 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 SOGA3Q5TF21 947 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 TRPM8Q7Z2W7 1104 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 SPICE1Q8N0Z3 855 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 TBC1D22AQ8WUA7 517 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 LMBR1Q8WVP7 490 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 NSUN4Q96CB9 384 aaKnown RBP17.29■□□□□ 0.36
CKAP4-201ENST00000378026 HOOK2Q96ED9 719 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 CNOT10Q9H9A5 744 aaKnown RBP17.29■□□□□ 0.36
CKAP4-201ENST00000378026 TFCP2L1Q9NZI6 479 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
CKAP4-201ENST00000378026 EME2A4GXA9 379 aaPredicted RBP17.29■□□□□ 0.36
CKAP4-201ENST00000378026 SLC37A4O43826 429 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 UBOX5O94941 541 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 COASYQ13057 564 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 GRM4Q14833 912 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 BZW1Q7L1Q6 419 aaKnown RBP17.29■□□□□ 0.36
CKAP4-201ENST00000378026 TPCN2Q8NHX9 752 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 SYN2Q92777 582 aaPredicted RBP17.29■□□□□ 0.36
CKAP4-201ENST00000378026 SNX24Q9Y343 169 aa17.29■□□□□ 0.36
CKAP4-201ENST00000378026 UBR2Q8IWV8 1755 aa17.28■□□□□ 0.36
CKAP4-201ENST00000378026 MYH3P11055 1940 aa17.28■□□□□ 0.36
CKAP4-201ENST00000378026 USP17L2Q6R6M4 530 aa17.28■□□□□ 0.36
CKAP4-201ENST00000378026 LRRC57Q8N9N7 239 aa17.28■□□□□ 0.36
CKAP4-201ENST00000378026 RAD54LQ92698 747 aa17.28■□□□□ 0.36
CKAP4-201ENST00000378026 P3H4Q92791 437 aa17.28■□□□□ 0.36
CKAP4-201ENST00000378026 FAM167BQ9BTA0 163 aa17.28■□□□□ 0.36
CKAP4-201ENST00000378026 RIC8AQ9NPQ8 531 aa17.28■□□□□ 0.36
CKAP4-201ENST00000378026 NAGPAQ9UK23 515 aa17.28■□□□□ 0.36
CKAP4-201ENST00000378026 TRPC6Q9Y210 931 aa17.28■□□□□ 0.36
CKAP4-201ENST00000378026 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
CKAP4-201ENST00000378026 RGS16O15492 202 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms