RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 LUC7LQ9NQ29 371 aaKnown RBP19.9■□□□□ 0.78
SF1-203ENST00000377387 KDM3AQ9Y4C1 1321 aa19.9■□□□□ 0.78
SF1-203ENST00000377387 MYBP10242 640 aa19.9■□□□□ 0.78
SF1-203ENST00000377387 EEF2P13639 858 aaKnown RBP19.9■□□□□ 0.78
SF1-203ENST00000377387 RBM5P52756 815 aaKnown RBP eCLIP19.9■□□□□ 0.78
SF1-203ENST00000377387 CDC37Q16543 378 aaPredicted RBP19.9■□□□□ 0.78
SF1-203ENST00000377387 GJB7Q6PEY0 223 aa19.9■□□□□ 0.78
SF1-203ENST00000377387 IFT20Q8IY31 132 aa19.9■□□□□ 0.78
SF1-203ENST00000377387 EDEM3Q9BZQ6 932 aa19.9■□□□□ 0.78
SF1-203ENST00000377387 DHX36Q9H2U1 1008 aaKnown RBP19.9■□□□□ 0.78
SF1-203ENST00000377387 CENPHQ9H3R5 247 aa19.9■□□□□ 0.78
SF1-203ENST00000377387 GRID2IPA4D2P6 1211 aa19.89■□□□□ 0.78
SF1-203ENST00000377387 ZEB2O60315 1214 aa19.89■□□□□ 0.78
SF1-203ENST00000377387 ITIH3Q06033 890 aa19.89■□□□□ 0.78
SF1-203ENST00000377387 PDCLQ13371 301 aa19.89■□□□□ 0.78
SF1-203ENST00000377387 OPA1O60313 960 aa19.89■□□□□ 0.77
SF1-203ENST00000377387 HLA-DOAP06340 250 aa19.89■□□□□ 0.77
SF1-203ENST00000377387 HOXA13P31271 388 aaPredicted RBP19.89■□□□□ 0.77
SF1-203ENST00000377387 KCNA1Q09470 495 aa19.89■□□□□ 0.77
SF1-203ENST00000377387 EMBQ6PCB8 327 aa19.89■□□□□ 0.77
SF1-203ENST00000377387 ZNF571Q7Z3V5 609 aaPredicted RBP19.89■□□□□ 0.77
SF1-203ENST00000377387 GCFC2P16383 781 aaKnown RBP19.89■□□□□ 0.77
SF1-203ENST00000377387 HLTFQ14527 1009 aaKnown RBP eCLIP19.89■□□□□ 0.77
SF1-203ENST00000377387 CFAP58Q5T655 872 aa19.89■□□□□ 0.77
SF1-203ENST00000377387 CYP2W1Q8TAV3 490 aa19.89■□□□□ 0.77
SF1-203ENST00000377387 AP1M1Q9BXS5 423 aa19.89■□□□□ 0.77
SF1-203ENST00000377387 NUCKS1Q9H1E3 243 aaKnown RBP19.89■□□□□ 0.77
SF1-203ENST00000377387 ATF5Q9Y2D1 282 aaPredicted RBP19.89■□□□□ 0.77
SF1-203ENST00000377387 RBAK-RBAKDNI3L0D1 243 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 CASP4P49662 377 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 PPFIA1Q13136 1202 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 SEPT2Q15019 361 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 SAMD1Q6SPF0 538 aaPredicted RBP19.88■□□□□ 0.77
SF1-203ENST00000377387 CERKQ8TCT0 537 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 CASKIN2Q8WXE0 1202 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 TAF4BQ92750 862 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 REEP2Q9BRK0 252 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 GANQ9H2C0 597 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 ARMCX3Q9UH62 379 aaPredicted RBP19.88■□□□□ 0.77
SF1-203ENST00000377387 PCDHB13Q9Y5F0 798 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 TMCO5BA8MYB1 307 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 PPEF1O14829 653 aaPredicted RBP19.88■□□□□ 0.77
SF1-203ENST00000377387 CEP104O60308 925 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 GDF11O95390 407 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 SLC12A3P55017 1021 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 ARHGAP4P98171 946 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 MEI1Q5TIA1 1274 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 SLFN13Q68D06 897 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 PPP1R18Q6NYC8 613 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 KIAA0825Q8IV33 1275 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 PODXL2Q9NZ53 605 aa19.88■□□□□ 0.77
SF1-203ENST00000377387 GOLGA8KD6RF30 607 aa19.87■□□□□ 0.77
SF1-203ENST00000377387 RAD51CO43502 376 aa19.87■□□□□ 0.77
SF1-203ENST00000377387 GNA14O95837 355 aa19.87■□□□□ 0.77
SF1-203ENST00000377387 NNTQ13423 1086 aa19.87■□□□□ 0.77
SF1-203ENST00000377387 MSL1Q68DK7 614 aa19.87■□□□□ 0.77
SF1-203ENST00000377387 DNM3Q9UQ16 869 aa19.87■□□□□ 0.77
SF1-203ENST00000377387 GIT2Q14161 759 aa19.87■□□□□ 0.77
SF1-203ENST00000377387 DDX42Q86XP3 938 aaKnown RBP eCLIP19.87■□□□□ 0.77
SF1-203ENST00000377387 DNAJC18Q9H819 358 aa19.87■□□□□ 0.77
SF1-203ENST00000377387 DBNDD1Q9H9R9 158 aa19.87■□□□□ 0.77
SF1-203ENST00000377387 TSKSQ9UJT2 592 aa19.87■□□□□ 0.77
SF1-203ENST00000377387 UCHL3P15374 230 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 RPS6KA1Q15418 735 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 EXOC3L4Q17RC7 722 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 BHMT2Q9H2M3 363 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 KCNMB3Q9NPA1 279 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 RGL1Q9NZL6 768 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 SWAP70Q9UH65 585 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 PLIN4Q96Q06 1357 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 MEIS2O14770 477 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 AKAP3O75969 853 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 GCNT3O95395 438 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 KSR1Q8IVT5 923 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 PIGOQ8TEQ8 1089 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 SYN2Q92777 582 aaPredicted RBP19.86■□□□□ 0.77
SF1-203ENST00000377387 AJAP1Q9UKB5 411 aaPredicted RBP19.86■□□□□ 0.77
SF1-203ENST00000377387 TAF1LQ8IZX4 1826 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 HOXD13P35453 343 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 HYIQ5T013 277 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 MAATS1Q7Z4T9 603 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 IRF2BP2Q7Z5L9 587 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 SH3GL2Q99962 352 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 AIPL1Q9NZN9 384 aa19.86■□□□□ 0.77
SF1-203ENST00000377387 DDTLA6NHG4 134 aaPredicted RBP19.85■□□□□ 0.77
SF1-203ENST00000377387 FAM86B1E9PN63 330 aa19.85■□□□□ 0.77
SF1-203ENST00000377387 FAM86B2P0C5J1 330 aa19.85■□□□□ 0.77
SF1-203ENST00000377387 XRCC5P13010 732 aaKnown RBP19.85■□□□□ 0.77
SF1-203ENST00000377387 PAK2Q13177 524 aa19.85■□□□□ 0.77
SF1-203ENST00000377387 KNOP1Q1ED39 458 aaKnown RBP19.85■□□□□ 0.77
SF1-203ENST00000377387 APOBEC3HQ6NTF7 200 aaKnown RBP19.85■□□□□ 0.77
SF1-203ENST00000377387 SPICE1Q8N0Z3 855 aa19.85■□□□□ 0.77
SF1-203ENST00000377387 RBM46Q8TBY0 533 aaKnown RBP19.85■□□□□ 0.77
SF1-203ENST00000377387 INPP4AQ96PE3 977 aaPredicted RBP19.85■□□□□ 0.77
SF1-203ENST00000377387 COA1Q9GZY4 146 aa19.85■□□□□ 0.77
SF1-203ENST00000377387 ZNF233A6NK53 670 aa19.85■□□□□ 0.77
SF1-203ENST00000377387 CHMP2AO43633 222 aa19.85■□□□□ 0.77
SF1-203ENST00000377387 SHOX2O60902 331 aaPredicted RBP19.85■□□□□ 0.77
SF1-203ENST00000377387 AFPP02771 609 aaKnown RBP19.85■□□□□ 0.77
SF1-203ENST00000377387 PON1P27169 355 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms