RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 LENG1Q96BZ8 264 aaPredicted RBP14.5□□□□□ -0.09
CBWD3-203ENST00000377344 NUP62CLQ9H1M0 184 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 GABBR1Q9UBS5 961 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 NRBP1Q9UHY1 535 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 PTCH2Q9Y6C5 1203 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 DYNC1LI2O43237 492 aaPredicted RBP14.5□□□□□ -0.09
CBWD3-203ENST00000377344 ACTN4O43707 911 aaKnown RBP14.5□□□□□ -0.09
CBWD3-203ENST00000377344 SUPT20HL2P0C7V6 817 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 CYBAP13498 195 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 TCF7P36402 384 aaPredicted RBP14.5□□□□□ -0.09
CBWD3-203ENST00000377344 QARSP47897 775 aaKnown RBP14.5□□□□□ -0.09
CBWD3-203ENST00000377344 DHX8Q14562 1220 aaKnown RBP14.5□□□□□ -0.09
CBWD3-203ENST00000377344 ABHD15Q6UXT9 468 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 SLAIN1Q8ND83 568 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 SEPT1Q8WYJ6 367 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 GPR20Q99678 358 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 TMEM63CQ9P1W3 806 aa14.5□□□□□ -0.09
CBWD3-203ENST00000377344 GSTTP1A0A1W2PQM5 241 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 E9PMD0 336 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 SLC26A4O43511 780 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 SLFN14P0C7P3 912 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 HSPA1AP0DMV8 641 aaKnown RBP14.49□□□□□ -0.09
CBWD3-203ENST00000377344 HSPA1BP0DMV9 641 aaKnown RBP14.49□□□□□ -0.09
CBWD3-203ENST00000377344 HSPA8P11142 646 aaKnown RBP14.49□□□□□ -0.09
CBWD3-203ENST00000377344 GRK4P32298 578 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 CENPFP49454 3210 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 PSMC5P62195 406 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 E2F4Q16254 413 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 TMEM119Q4V9L6 283 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 HYIQ5T013 277 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 CCDC183Q5T5S1 534 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 UTP14CQ5TAP6 766 aaKnown RBP14.49□□□□□ -0.09
CBWD3-203ENST00000377344 TLK2Q86UE8 772 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 STAMQ92783 540 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 CCDC34Q96HJ3 373 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 TIGD1Q96MW7 591 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 GZF1Q9H116 711 aaPredicted RBP14.49□□□□□ -0.09
CBWD3-203ENST00000377344 TNMDQ9H2S6 317 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 CLSTN2Q9H4D0 955 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 ZSWIM4Q9H7M6 989 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 USP25Q9UHP3 1055 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 DNM3Q9UQ16 869 aa14.49□□□□□ -0.09
CBWD3-203ENST00000377344 ATG7O95352 703 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 SSBP05455 408 aaKnown RBP eCLIP14.48□□□□□ -0.09
CBWD3-203ENST00000377344 CCND3P30281 292 aaPredicted RBP14.48□□□□□ -0.09
CBWD3-203ENST00000377344 AFMP43652 599 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 PSMC6P62333 389 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 UGCGQ16739 394 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 NAALADL2Q58DX5 795 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 KCNK18Q7Z418 384 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 CCDC60Q8IWA6 550 aaPredicted RBP14.48□□□□□ -0.09
CBWD3-203ENST00000377344 GRAMD1CQ8IYS0 662 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 PPTC7Q8NI37 304 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 PIGOQ8TEQ8 1089 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 AFG1LQ8WV93 481 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 LARP4BQ92615 738 aaKnown RBP14.48□□□□□ -0.09
CBWD3-203ENST00000377344 ATP6V0A1Q93050 837 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 AP5M1Q9H0R1 490 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 AZI2Q9H6S1 392 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 ZNF302Q9NR11 478 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 WRAP73Q9P2S5 460 aaPredicted RBP14.48□□□□□ -0.09
CBWD3-203ENST00000377344 STK17AQ9UEE5 414 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 GNEQ9Y223 722 aaKnown RBP14.48□□□□□ -0.09
CBWD3-203ENST00000377344 SEPT4O43236 478 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 INHAP05111 366 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 LBX1P52954 281 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 MCM6Q14566 821 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 FAM160B1Q5W0V3 765 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 KANK3Q6NY19 840 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 PDXDC2PQ6P474 469 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 CKAP2LQ8IYA6 745 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 LRRC15Q8TF66 581 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 RAD54LQ92698 747 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 GLG1Q92896 1179 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 EMID1Q96A84 441 aaPredicted RBP14.48□□□□□ -0.09
CBWD3-203ENST00000377344 NACC1Q96RE7 527 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 CUEDC2Q9H467 287 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 BLOC1S4Q9NUP1 217 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 HOOK1Q9UJC3 728 aaKnown RBP14.48□□□□□ -0.09
CBWD3-203ENST00000377344 PTPN22Q9Y2R2 807 aa14.48□□□□□ -0.09
CBWD3-203ENST00000377344 ZBTB39O15060 712 aa14.47□□□□□ -0.09
CBWD3-203ENST00000377344 DKC1O60832 514 aaKnown RBP eCLIP14.47□□□□□ -0.09
CBWD3-203ENST00000377344 MUTP22033 750 aa14.47□□□□□ -0.09
CBWD3-203ENST00000377344 CTCFP49711 727 aaPredicted RBP14.47□□□□□ -0.09
CBWD3-203ENST00000377344 STAT5BP51692 787 aa14.47□□□□□ -0.09
CBWD3-203ENST00000377344 SV2BQ7L1I2 683 aa14.47□□□□□ -0.09
CBWD3-203ENST00000377344 SH3TC2Q8TF17 1288 aa14.47□□□□□ -0.09
CBWD3-203ENST00000377344 ERCC4Q92889 916 aaPredicted RBP14.47□□□□□ -0.09
CBWD3-203ENST00000377344 PAGE5Q96GU1 130 aa14.47□□□□□ -0.09
CBWD3-203ENST00000377344 CCDC43Q96MW1 224 aaKnown RBP14.47□□□□□ -0.09
CBWD3-203ENST00000377344 HTTP42858 3142 aa14.46□□□□□ -0.09
CBWD3-203ENST00000377344 RARBP10826 455 aa14.46□□□□□ -0.09
CBWD3-203ENST00000377344 PNOCQ13519 176 aa14.46□□□□□ -0.09
CBWD3-203ENST00000377344 TRIM50Q86XT4 487 aa14.46□□□□□ -0.09
CBWD3-203ENST00000377344 C4orf19Q8IY42 314 aa14.46□□□□□ -0.09
CBWD3-203ENST00000377344 BHMT2Q9H2M3 363 aa14.46□□□□□ -0.09
CBWD3-203ENST00000377344 DUSP11O75319 330 aaKnown RBP14.45□□□□□ -0.1
CBWD3-203ENST00000377344 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
CBWD3-203ENST00000377344 PLA2G4BP0C869 781 aa14.45□□□□□ -0.1
CBWD3-203ENST00000377344 YWHABP31946 246 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms