RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 SLC43A3Q8NBI5 491 aa13.93□□□□□ -0.18
VRK3-202ENST00000377011 INPP4AQ96PE3 977 aaPredicted RBP13.93□□□□□ -0.18
VRK3-202ENST00000377011 TRPV6Q9H1D0 765 aa13.93□□□□□ -0.18
VRK3-202ENST00000377011 RIC8AQ9NPQ8 531 aa13.93□□□□□ -0.18
VRK3-202ENST00000377011 CLIC4Q9Y696 253 aa13.93□□□□□ -0.18
VRK3-202ENST00000377011 ARVCFO00192 962 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 IKBKBO14920 756 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 GGPS1O95749 300 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 TUBB4AP04350 444 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 TNNT1P13805 278 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 EPHB4P54760 987 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 ITGA7Q13683 1181 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 HIC1Q14526 733 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 HABP4Q5JVS0 413 aaKnown RBP13.92□□□□□ -0.18
VRK3-202ENST00000377011 UTP14CQ5TAP6 766 aaKnown RBP13.92□□□□□ -0.18
VRK3-202ENST00000377011 ANKRD33Q7Z3H0 272 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 SAMD3Q8N6K7 520 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 AOPEPQ8N6M6 819 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 CCDC150Q8NCX0 1101 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 WASF1Q92558 559 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 BADQ92934 168 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 PKD2L1Q9P0L9 805 aa13.92□□□□□ -0.18
VRK3-202ENST00000377011 A0A1B0GVL5 298 aa13.91□□□□□ -0.18
VRK3-202ENST00000377011 ZNF202O95125 648 aa13.91□□□□□ -0.18
VRK3-202ENST00000377011 ZNF286BP0CG31 522 aa13.91□□□□□ -0.18
VRK3-202ENST00000377011 ADCY7P51828 1080 aa13.91□□□□□ -0.18
VRK3-202ENST00000377011 TRAF1Q13077 416 aa13.91□□□□□ -0.18
VRK3-202ENST00000377011 NPY5RQ15761 445 aa13.91□□□□□ -0.18
VRK3-202ENST00000377011 PCNX4Q63HM2 1172 aa13.91□□□□□ -0.18
VRK3-202ENST00000377011 CUL5Q93034 780 aa13.91□□□□□ -0.18
VRK3-202ENST00000377011 ALG1Q9BT22 464 aa13.91□□□□□ -0.18
VRK3-202ENST00000377011 TRMT13Q9NUP7 481 aaKnown RBP13.91□□□□□ -0.18
VRK3-202ENST00000377011 A0A0U1RQG5 324 aaPredicted RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 SPATA31C2B4DYI2 1134 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 SOX1O00570 391 aaPredicted RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 B4GALT4O60513 344 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 GH1P01241 217 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 CD4P01730 458 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 CLTBP09497 229 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 U2AF2P26368 475 aaKnown RBP eCLIP13.9□□□□□ -0.18
VRK3-202ENST00000377011 CHMP4BP1P59074 171 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 TPD52L1Q16890 204 aaPredicted RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 NBPF20Q3BBV1 942 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 CELF3Q5SZQ8 465 aaKnown RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 PDCL2Q8N4E4 241 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 CTAGE1Q96RT6 745 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 MPHOSPH6Q99547 160 aaKnown RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 RNF26Q9BY78 433 aaPredicted RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 ANO3Q9BYT9 981 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 TUBE1Q9UJT0 475 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 TBX21Q9UL17 535 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 HPSEQ9Y251 543 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 UBIAD1Q9Y5Z9 338 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 TRIP12Q14669 1992 aaPredicted RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 CCDC196A0A1B0GTZ2 297 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 B4DLN1 442 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 KIF28PB7ZC32 967 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 NKRFO15226 690 aaKnown RBP eCLIP13.9□□□□□ -0.18
VRK3-202ENST00000377011 NRDCO43847 1150 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 ARP10275 920 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 PFKFB1P16118 471 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 MRPL12P52815 198 aaKnown RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 CCZ1BP86790 482 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 CCZ1P86791 482 aaPredicted RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 SP4Q02446 784 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 TRIM29Q14134 588 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 NYAP1Q6ZVC0 841 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 CYFIP1Q7L576 1253 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 DHX37Q8IY37 1157 aaKnown RBP13.9□□□□□ -0.18
VRK3-202ENST00000377011 CRYGNQ8WXF5 182 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 ZMYND12Q9H0C1 365 aa13.9□□□□□ -0.18
VRK3-202ENST00000377011 CUTAO60888 179 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 CYP2C9P11712 490 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 SKILP12757 684 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 KCNA2P16389 499 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 ICAM3P32942 547 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 CPT1AP50416 773 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 C9orf50Q5SZB4 431 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 KRT40Q6A162 431 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 PPP1R18Q6NYC8 613 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 TRIM50Q86XT4 487 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 CCDC112Q8NEF3 446 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 VWCEQ96DN2 955 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 C16orf45Q96MC5 204 aaPredicted RBP13.89□□□□□ -0.19
VRK3-202ENST00000377011 PPP1R12CQ9BZL4 782 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 KCNJ14Q9UNX9 436 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 MORC2Q9Y6X9 1032 aaPredicted RBP13.89□□□□□ -0.19
VRK3-202ENST00000377011 EYSQ5T1H1 3165 aa13.89□□□□□ -0.19
VRK3-202ENST00000377011 CHD9Q3L8U1 2897 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 SPDYE3A6NKU9 549 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 FAM86B1E9PN63 330 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 KIAA0355O15063 1070 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 FAM86B2P0C5J1 330 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 ZNF200P98182 395 aaPredicted RBP13.88□□□□□ -0.19
VRK3-202ENST00000377011 PTPAQ15257 358 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 CEP135Q66GS9 1140 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 EMID1Q96A84 441 aaPredicted RBP13.88□□□□□ -0.19
VRK3-202ENST00000377011 SPATA33Q96N06 139 aa13.88□□□□□ -0.19
VRK3-202ENST00000377011 TOX2Q96NM4 488 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms