RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 BMP2KQ9NSY1 1161 aaPredicted RBP11.7□□□□□ -0.54
PDPN-203ENST00000376061 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.7□□□□□ -0.54
PDPN-203ENST00000376061 WRAP73Q9P2S5 460 aaPredicted RBP11.7□□□□□ -0.54
PDPN-203ENST00000376061 MAN1B1Q9UKM7 699 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 TELO2Q9Y4R8 837 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 SYNGAP1Q96PV0 1343 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 E9PMD0 336 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 SORBS3O60504 671 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 FARP2O94887 1054 aaPredicted RBP11.69□□□□□ -0.54
PDPN-203ENST00000376061 SLITRK3O94933 977 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 SMC2O95347 1197 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 SNAI1O95863 264 aaPredicted RBP11.69□□□□□ -0.54
PDPN-203ENST00000376061 MYL1P05976 194 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 TGFB3P10600 412 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 MUTP22033 750 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 SARSP49591 514 aaKnown RBP11.69□□□□□ -0.54
PDPN-203ENST00000376061 LACTBP83111 547 aaPredicted RBP11.69□□□□□ -0.54
PDPN-203ENST00000376061 DHX8Q14562 1220 aaKnown RBP11.69□□□□□ -0.54
PDPN-203ENST00000376061 DPCR1Q3MIW9 517 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 CCDC62Q6P9F0 684 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 KCNV1Q6PIU1 500 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 SMAP1Q8IYB5 467 aaPredicted RBP11.69□□□□□ -0.54
PDPN-203ENST00000376061 BANK1Q8NDB2 785 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 SCFD2Q8WU76 684 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 KIF12Q96FN5 646 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 TRIM47Q96LD4 638 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 APBA2Q99767 749 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 ARHGAP39Q9C0H5 1083 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 SLC5A4Q9NY91 659 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 SLC9A2Q9UBY0 812 aa11.69□□□□□ -0.54
PDPN-203ENST00000376061 MYMKA6NI61 221 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 GGPS1O95749 300 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 TBC1D8O95759 1140 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 P4HBP07237 508 aaKnown RBP11.68□□□□□ -0.54
PDPN-203ENST00000376061 PLA2G4BP0C869 781 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 RGS2P41220 211 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 SLC12A3P55017 1021 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 FCGRTP55899 365 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 NLRP12P59046 1061 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 ACTR2P61160 394 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 PSMC6P62333 389 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 SP4Q02446 784 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 UGCGQ16739 394 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 LY6KQ17RY6 165 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 ANO6Q4KMQ2 910 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 TAPT1Q6NXT6 567 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 C11orf57Q6ZUT1 292 aaPredicted RBP11.68□□□□□ -0.54
PDPN-203ENST00000376061 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 CYFIP1Q7L576 1253 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 TPH2Q8IWU9 490 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 MSL3Q8N5Y2 521 aaKnown RBP11.68□□□□□ -0.54
PDPN-203ENST00000376061 KCTD17Q8N5Z5 321 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 GIMAP8Q8ND71 665 aaPredicted RBP11.68□□□□□ -0.54
PDPN-203ENST00000376061 C7orf25Q9BPX7 421 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 TINF2Q9BSI4 451 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 TRIM9Q9C026 710 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 PDGFCQ9NRA1 345 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 ANO10Q9NW15 660 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 RNF186Q9NXI6 227 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 FLRT1Q9NZU1 646 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 DDX41Q9UJV9 622 aaKnown RBP11.68□□□□□ -0.54
PDPN-203ENST00000376061 GJD2Q9UKL4 321 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 DNM3Q9UQ16 869 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 SAMM50Q9Y512 469 aa11.68□□□□□ -0.54
PDPN-203ENST00000376061 RBM47A0AV96 593 aaKnown RBP11.67□□□□□ -0.54
PDPN-203ENST00000376061 KLRC4O43908 158 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 EYA4O95677 639 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 RPN1P04843 607 aaKnown RBP11.67□□□□□ -0.54
PDPN-203ENST00000376061 SSBP05455 408 aaKnown RBP eCLIP11.67□□□□□ -0.54
PDPN-203ENST00000376061 SUPT20HL2P0C7V6 817 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 BMP6P22004 513 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 PSMC4P43686 418 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 QARSP47897 775 aaKnown RBP11.67□□□□□ -0.54
PDPN-203ENST00000376061 AMPD3Q01432 767 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 MORC3Q14149 939 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 NEDD9Q14511 834 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 TTLL4Q14679 1199 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 CNNM4Q6P4Q7 775 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 METTL7BQ6UX53 244 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 TRIML1Q8N9V2 468 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 GSDMAQ96QA5 445 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 RBSNQ9H1K0 784 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 DNAJC25Q9H1X3 360 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 ZSWIM4Q9H7M6 989 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 PCDHA10Q9Y5I2 948 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 IGSF9BQ9UPX0 1349 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 MYH11P35749 1972 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 GOLGA6L3A6NEY3 463 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 TRPA1O75762 1119 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 LYPLA2O95372 231 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 IGHA2P01877 340 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 PSAPP07602 524 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 TXNP10599 105 aaKnown RBP11.67□□□□□ -0.54
PDPN-203ENST00000376061 CYP11B2P19099 503 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 CYP2B6P20813 491 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 PSMC5P62195 406 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 ASIC1P78348 528 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 CAP1Q01518 475 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 CCL14Q16627 93 aa11.67□□□□□ -0.54
PDPN-203ENST00000376061 CELF3Q5SZQ8 465 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms