RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 IER5Q5VY09 327 aa26.56■■□□□ 1.84
C9orf47-202ENST00000375850 PTCRAQ6ISU1 281 aaPredicted RBP26.56■■□□□ 1.84
C9orf47-202ENST00000375850 HEATR3Q7Z4Q2 680 aa26.56■■□□□ 1.84
C9orf47-202ENST00000375850 GJD3Q8N144 294 aa26.56■■□□□ 1.84
C9orf47-202ENST00000375850 ADGRA3Q8IWK6 1321 aa26.56■■□□□ 1.84
C9orf47-202ENST00000375850 GRXCR2A6NFK2 248 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 hCG_1984214I3L0E3 225 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 MARK3P27448 753 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 FBXO47Q5MNV8 452 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 MICU3Q86XE3 530 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 ZNF713Q8N859 430 aaPredicted RBP26.55■■□□□ 1.84
C9orf47-202ENST00000375850 MXRA8Q9BRK3 442 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 SDF4Q9BRK5 362 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 FTHL17Q9BXU8 183 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 GLT8D2Q9H1C3 349 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 SLC9A2Q9UBY0 812 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 RAPGEFL1Q9UHV5 662 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 NFASCO94856 1347 aa26.55■■□□□ 1.84
C9orf47-202ENST00000375850 BRWD1Q9NSI6 2320 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 M0QZ92 97 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 ENPP3O14638 875 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 CTNNB1P35222 781 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 BMPR1AP36894 532 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 MRPS6P82932 125 aaKnown RBP26.54■■□□□ 1.84
C9orf47-202ENST00000375850 MARCH8Q5T0T0 291 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 CCDC82Q8N4S0 544 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 DNAJB3Q8WWF6 145 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 CLP1Q92989 425 aaKnown RBP26.54■■□□□ 1.84
C9orf47-202ENST00000375850 ANO2Q9NQ90 1003 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 KCNH7Q9NS40 1196 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 CDY2AQ9Y6F7 541 aa26.54■■□□□ 1.84
C9orf47-202ENST00000375850 TCEAL5Q5H9L2 206 aa26.53■■□□□ 1.84
C9orf47-202ENST00000375850 PLPPR4Q7Z2D5 763 aa26.53■■□□□ 1.84
C9orf47-202ENST00000375850 PLVAPQ9BX97 442 aa26.53■■□□□ 1.84
C9orf47-202ENST00000375850 RC3H2Q9HBD1 1191 aaKnown RBP26.53■■□□□ 1.84
C9orf47-202ENST00000375850 PKD2L1Q9P0L9 805 aa26.53■■□□□ 1.84
C9orf47-202ENST00000375850 INSRRP14616 1297 aa26.52■■□□□ 1.84
C9orf47-202ENST00000375850 SLC26A2P50443 739 aa26.52■■□□□ 1.84
C9orf47-202ENST00000375850 RIC8AQ9NPQ8 531 aa26.52■■□□□ 1.84
C9orf47-202ENST00000375850 PRKAG3Q9UGI9 489 aa26.52■■□□□ 1.84
C9orf47-202ENST00000375850 hCG_1642624A0A1W2PR95 340 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 ALADP13716 330 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 IL9P15248 144 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 NAPAP54920 295 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 AP3B2Q13367 1082 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 BTG3Q14201 252 aaPredicted RBP26.51■■□□□ 1.83
C9orf47-202ENST00000375850 APOA5Q6Q788 366 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 NME8Q8N427 588 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 ZNF689Q96CS4 500 aaPredicted RBP26.51■■□□□ 1.83
C9orf47-202ENST00000375850 NEK1Q96PY6 1258 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 CD320Q9NPF0 282 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 TRPC6Q9Y210 931 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 PCDHA2Q9Y5H9 948 aa26.51■■□□□ 1.83
C9orf47-202ENST00000375850 CNTNAP5Q8WYK1 1306 aa26.5■■□□□ 1.83
C9orf47-202ENST00000375850 SSTR3P32745 418 aaPredicted RBP26.5■■□□□ 1.83
C9orf47-202ENST00000375850 IGBP1P78318 339 aa26.5■■□□□ 1.83
C9orf47-202ENST00000375850 CEP55Q53EZ4 464 aa26.5■■□□□ 1.83
C9orf47-202ENST00000375850 NAALADL2Q58DX5 795 aa26.5■■□□□ 1.83
C9orf47-202ENST00000375850 WWC2Q6AWC2 1192 aa26.5■■□□□ 1.83
C9orf47-202ENST00000375850 PCYT2Q99447 389 aa26.5■■□□□ 1.83
C9orf47-202ENST00000375850 LRRC2Q9BYS8 371 aa26.5■■□□□ 1.83
C9orf47-202ENST00000375850 TRPV2Q9Y5S1 764 aa26.5■■□□□ 1.83
C9orf47-202ENST00000375850 DOCK5Q9H7D0 1870 aa26.5■■□□□ 1.83
C9orf47-202ENST00000375850 KAT6AQ92794 2004 aa26.49■■□□□ 1.83
C9orf47-202ENST00000375850 RALGAPA2Q2PPJ7 1873 aa26.49■■□□□ 1.83
C9orf47-202ENST00000375850 DGKIO75912 1065 aa26.49■■□□□ 1.83
C9orf47-202ENST00000375850 LINC00271P0C7V0 271 aa26.49■■□□□ 1.83
C9orf47-202ENST00000375850 STAG3L1P0CL83 205 aa26.49■■□□□ 1.83
C9orf47-202ENST00000375850 STAT5BP51692 787 aa26.49■■□□□ 1.83
C9orf47-202ENST00000375850 RCAN1P53805 252 aa26.49■■□□□ 1.83
C9orf47-202ENST00000375850 ACTR2P61160 394 aa26.49■■□□□ 1.83
C9orf47-202ENST00000375850 RTN1Q16799 776 aa26.49■■□□□ 1.83
C9orf47-202ENST00000375850 RAB11FIP4Q86YS3 637 aa26.49■■□□□ 1.83
C9orf47-202ENST00000375850 KDM3AQ9Y4C1 1321 aa26.48■■□□□ 1.83
C9orf47-202ENST00000375850 SMIM35A0A1B0GVV1 85 aa26.48■■□□□ 1.83
C9orf47-202ENST00000375850 H3BQ06 376 aaPredicted RBP26.48■■□□□ 1.83
C9orf47-202ENST00000375850 ZBTB43O43298 467 aa26.48■■□□□ 1.83
C9orf47-202ENST00000375850 ADCY7P51828 1080 aa26.48■■□□□ 1.83
C9orf47-202ENST00000375850 IRX6P78412 446 aaPredicted RBP26.48■■□□□ 1.83
C9orf47-202ENST00000375850 BMP2KLQ5H9B9 411 aa26.48■■□□□ 1.83
C9orf47-202ENST00000375850 DHX32Q7L7V1 743 aaKnown RBP26.48■■□□□ 1.83
C9orf47-202ENST00000375850 NIPA1Q7RTP0 329 aa26.48■■□□□ 1.83
C9orf47-202ENST00000375850 NPAS4Q8IUM7 802 aa26.48■■□□□ 1.83
C9orf47-202ENST00000375850 CMTR2Q8IYT2 770 aaKnown RBP26.48■■□□□ 1.83
C9orf47-202ENST00000375850 KHSRPQ92945 711 aaKnown RBP eCLIP26.48■■□□□ 1.83
C9orf47-202ENST00000375850 P2RX5Q93086 422 aa26.48■■□□□ 1.83
C9orf47-202ENST00000375850 PPP2R3CQ969Q6 453 aa26.48■■□□□ 1.83
C9orf47-202ENST00000375850 ANO3Q9BYT9 981 aa26.48■■□□□ 1.83
C9orf47-202ENST00000375850 FAM49AQ9H0Q0 323 aaPredicted RBP26.48■■□□□ 1.83
C9orf47-202ENST00000375850 RNF216Q9NWF9 866 aaPredicted RBP26.48■■□□□ 1.83
C9orf47-202ENST00000375850 IGSF9BQ9UPX0 1349 aa26.47■■□□□ 1.83
C9orf47-202ENST00000375850 ATG7O95352 703 aa26.47■■□□□ 1.83
C9orf47-202ENST00000375850 SREBF1P36956 1147 aa26.47■■□□□ 1.83
C9orf47-202ENST00000375850 COL9A3Q14050 684 aaPredicted RBP26.47■■□□□ 1.83
C9orf47-202ENST00000375850 KRT32Q14532 448 aa26.47■■□□□ 1.83
C9orf47-202ENST00000375850 PLCB4Q15147 1175 aa26.47■■□□□ 1.83
C9orf47-202ENST00000375850 TSGA10IPQ3SY00 556 aa26.47■■□□□ 1.83
C9orf47-202ENST00000375850 AGO3Q9H9G7 860 aaKnown RBP26.47■■□□□ 1.83
C9orf47-202ENST00000375850 AGO4Q9HCK5 861 aaKnown RBP26.47■■□□□ 1.83
C9orf47-202ENST00000375850 C11orf16Q9NQ32 467 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms