RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 RAPGEF1Q13905 1077 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 ALS2CLQ60I27 953 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 GALNT17Q6IS24 598 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 SH3BP5LQ7L8J4 393 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 IQCKQ8N0W5 287 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 FAM133AQ8N9E0 248 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 DNAJC18Q9H819 358 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 RAD51CO43502 376 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 INPP5BP32019 993 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 PDE4CQ08493 712 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
MSH5-203ENST00000375750 CCDC84Q86UT8 332 aaPredicted RBP16.68■□□□□ 0.26
MSH5-203ENST00000375750 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
MSH5-203ENST00000375750 RAD54LQ92698 747 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 PSMD1Q99460 953 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 GDF3Q9NR23 364 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 ACTN1P12814 892 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 HPDP32754 393 aaPredicted RBP16.68■□□□□ 0.26
MSH5-203ENST00000375750 SFMBT2Q5VUG0 894 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 IFT20Q8IY31 132 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 SEC63Q9UGP8 760 aaKnown RBP16.68■□□□□ 0.26
MSH5-203ENST00000375750 SWAP70Q9UH65 585 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 CAPN7Q9Y6W3 813 aa16.68■□□□□ 0.26
MSH5-203ENST00000375750 BACH1O14867 736 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 EPB41P11171 864 aaKnown RBP16.67■□□□□ 0.26
MSH5-203ENST00000375750 HNRNPH1P31943 449 aaKnown RBP16.67■□□□□ 0.26
MSH5-203ENST00000375750 NOVP48745 357 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 TNNI2P48788 182 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 SKOR1P84550 965 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 IDI2Q9BXS1 227 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 GNA11P29992 359 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 KIAA0753Q2KHM9 967 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 MMS22LQ6ZRQ5 1243 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 SPZ1Q9BXG8 430 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 GPCPD1Q9NPB8 672 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 PIM2Q9P1W9 311 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 COL4A5P29400 1685 aa16.67■□□□□ 0.26
MSH5-203ENST00000375750 IGKV6D-41A0A0C4DH26 115 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 LSP1P33241 339 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 COASYQ13057 564 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 GBP6Q6ZN66 633 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 MAATS1Q7Z4T9 603 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 E9PMD0 336 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 GUCY2CP25092 1073 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 SLC9C1Q4G0N8 1177 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 RSBN1LQ6PCB5 846 aaPredicted RBP16.66■□□□□ 0.26
MSH5-203ENST00000375750 AP1M1Q9BXS5 423 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 ZNF646O15015 1829 aaPredicted RBP16.66■□□□□ 0.26
MSH5-203ENST00000375750 GRID2IPA4D2P6 1211 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 PDHBP11177 359 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 R3HDM1Q15032 1099 aaKnown RBP16.66■□□□□ 0.26
MSH5-203ENST00000375750 NAB2Q15742 525 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 CEP85LQ5SZL2 805 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 MYOCDQ8IZQ8 938 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 ZHX3Q9H4I2 956 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 LRRC4CQ9HCJ2 640 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 PI4KBQ9UBF8 816 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 PLAAQ9Y263 795 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 COL4A3BPQ9Y5P4 624 aa16.66■□□□□ 0.26
MSH5-203ENST00000375750 PVALEFA0A1B0GWK0 134 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 TTLL1O95922 423 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 GRIPAP1Q4V328 841 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 DNAJC19Q96DA6 116 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 DHX36Q9H2U1 1008 aaKnown RBP16.65■□□□□ 0.26
MSH5-203ENST00000375750 KCNK3O14649 394 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 NR1D1P20393 614 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 ERVK-9P63128 1117 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 LRRC63Q05C16 580 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 HLTFQ14527 1009 aaKnown RBP eCLIP16.65■□□□□ 0.26
MSH5-203ENST00000375750 COBLL1Q53SF7 1204 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 MEI1Q5TIA1 1274 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 NAA35Q5VZE5 725 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 INPP4AQ96PE3 977 aaPredicted RBP16.65■□□□□ 0.26
MSH5-203ENST00000375750 NEUROG2Q9H2A3 272 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 PANK4Q9NVE7 773 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 SRCAPQ6ZRS2 3230 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 PLIN4Q96Q06 1357 aa16.65■□□□□ 0.26
MSH5-203ENST00000375750 CLRN2A0PK11 232 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 SERPING1P05155 500 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 VIL1P09327 827 aaKnown RBP16.64■□□□□ 0.25
MSH5-203ENST00000375750 POLD1P28340 1107 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 FLT3P36888 993 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 TGFB2P61812 414 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 PAK2Q13177 524 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 RNF187Q5TA31 235 aaPredicted RBP16.64■□□□□ 0.25
MSH5-203ENST00000375750 KRT79Q5XKE5 535 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 CCDC125Q86Z20 511 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 TSG101Q99816 390 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 BCAS3Q9H6U6 928 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 PPANQ9NQ55 473 aaKnown RBP16.64■□□□□ 0.25
MSH5-203ENST00000375750 SSU72P8A0A1W2PR75 194 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 TNFRSF8P28908 595 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 PPP1R2P41236 205 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 KLHL30Q0D2K2 578 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 SEMA3FQ13275 785 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 ZCWPW2Q504Y3 356 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 MTFR1LQ9H019 292 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 CEP72Q9P209 647 aa16.64■□□□□ 0.25
MSH5-203ENST00000375750 TCP10L2B9ZVM9 353 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms