RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 POP1Q99575 1024 aaKnown RBP13.95□□□□□ -0.18
LSM2-208ENST00000375661 GPR20Q99678 358 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 C11orf84Q9BUA3 381 aaPredicted RBP13.95□□□□□ -0.18
LSM2-208ENST00000375661 CLDND1Q9NY35 253 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 NRCAMQ92823 1304 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 SPATA31C2B4DYI2 1134 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 ZBTB43O43298 467 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 CTSHP09668 335 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 CTNNB1P35222 781 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 BMPR1AP36894 532 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 CTC1Q2NKJ3 1217 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 XRRA1Q6P2D8 792 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 FCHSD1Q86WN1 690 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 MICU3Q86XE3 530 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 SENP7Q9BQF6 1050 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 LARP6Q9BRS8 491 aaKnown RBP13.94□□□□□ -0.18
LSM2-208ENST00000375661 SETD4Q9NVD3 440 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 KIAA1671Q9BY89 1806 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 PIEZO1Q92508 2521 aa13.94□□□□□ -0.18
LSM2-208ENST00000375661 ADGRA3Q8IWK6 1321 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 PNMA6FA0A0J9YX94 578 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 RPLP2P05387 115 aaKnown RBP13.93□□□□□ -0.18
LSM2-208ENST00000375661 LINC00271P0C7V0 271 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 CALM1P0DP23 149 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 CALM2P0DP24 149 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 CALM3P0DP25 149 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 LTBRP36941 435 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 AK2P54819 239 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 MRPS9P82933 396 aaKnown RBP13.93□□□□□ -0.18
LSM2-208ENST00000375661 NHLH1Q02575 133 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 SMAD2Q15796 467 aaKnown RBP13.93□□□□□ -0.18
LSM2-208ENST00000375661 TAF2Q6P1X5 1199 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 SYNE3Q6ZMZ3 975 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 CYFIP1Q7L576 1253 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 HOMER1Q86YM7 354 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 FANCBQ8NB91 859 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 GIMAP8Q8ND71 665 aaPredicted RBP13.93□□□□□ -0.18
LSM2-208ENST00000375661 CTCFLQ8NI51 663 aaPredicted RBP13.93□□□□□ -0.18
LSM2-208ENST00000375661 LMBR1Q8WVP7 490 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 CLP1Q92989 425 aaKnown RBP13.93□□□□□ -0.18
LSM2-208ENST00000375661 MFSD14AQ96MC6 490 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 PIGSQ96S52 555 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 OSBPL7Q9BZF2 842 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 EHMT1Q9H9B1 1298 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 FAM217BQ9NTX9 383 aaPredicted RBP13.93□□□□□ -0.18
LSM2-208ENST00000375661 ZNF318Q5VUA4 2279 aa13.93□□□□□ -0.18
LSM2-208ENST00000375661 MYO7AQ13402 2215 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 LOXHD1Q8IVV2 1947 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 MBTPS2O43462 519 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 CYTH3O43739 400 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 PDIA3P30101 505 aaKnown RBP13.92□□□□□ -0.18
LSM2-208ENST00000375661 CDC27P30260 824 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 MRE11P49959 708 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 RCAN1P53805 252 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 ARHGAP4P98171 946 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 SEMA3FQ13275 785 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 RABEP1Q15276 862 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 HERC4Q5GLZ8 1057 aaPredicted RBP13.92□□□□□ -0.18
LSM2-208ENST00000375661 RSPH3Q86UC2 560 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 PLVAPQ9BX97 442 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 BCAS3Q9H6U6 928 aa13.92□□□□□ -0.18
LSM2-208ENST00000375661 RC3H2Q9HBD1 1191 aaKnown RBP13.92□□□□□ -0.18
LSM2-208ENST00000375661 GOLGA8AA7E2F4 631 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 GOLGA8BA8MQT2 603 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 GRM6O15303 877 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 PLEKHA8P1O95397 391 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 CHRNA1P02708 482 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 MMP1P03956 469 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 KIF5BP33176 963 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 IRS1P35568 1242 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 SMAD4Q13485 552 aaKnown RBP13.91□□□□□ -0.18
LSM2-208ENST00000375661 RTN1Q16799 776 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 PCNX4Q63HM2 1172 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 TMTC3Q6ZXV5 915 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 NLRX1Q86UT6 975 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 CMTR1Q8N1G2 835 aaKnown RBP13.91□□□□□ -0.18
LSM2-208ENST00000375661 SRBD1Q8N5C6 995 aaKnown RBP13.91□□□□□ -0.18
LSM2-208ENST00000375661 P2RX5Q93086 422 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 PPP2R3CQ969Q6 453 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 ZNF689Q96CS4 500 aaPredicted RBP13.91□□□□□ -0.18
LSM2-208ENST00000375661 ZNF274Q96GC6 653 aaPredicted RBP13.91□□□□□ -0.18
LSM2-208ENST00000375661 ZFP91Q96JP5 570 aaPredicted RBP13.91□□□□□ -0.18
LSM2-208ENST00000375661 FBXL18Q96ME1 805 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 TPCN1Q9ULQ1 816 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
LSM2-208ENST00000375661 NID2Q14112 1375 aa13.91□□□□□ -0.18
LSM2-208ENST00000375661 PIK3CDO00329 1044 aa13.9□□□□□ -0.18
LSM2-208ENST00000375661 SMARCA1P28370 1054 aa13.9□□□□□ -0.18
LSM2-208ENST00000375661 ADD1P35611 737 aaKnown RBP13.9□□□□□ -0.18
LSM2-208ENST00000375661 GNAQP50148 359 aa13.9□□□□□ -0.18
LSM2-208ENST00000375661 METAP2P50579 478 aaKnown RBP eCLIP13.9□□□□□ -0.18
LSM2-208ENST00000375661 CCT2P78371 535 aaKnown RBP13.9□□□□□ -0.18
LSM2-208ENST00000375661 MGAT3Q09327 533 aa13.9□□□□□ -0.18
LSM2-208ENST00000375661 HYAL1Q12794 435 aa13.9□□□□□ -0.18
LSM2-208ENST00000375661 ANKRD1Q15327 319 aa13.9□□□□□ -0.18
LSM2-208ENST00000375661 UTP14CQ5TAP6 766 aaKnown RBP13.9□□□□□ -0.18
LSM2-208ENST00000375661 TRIM50Q86XT4 487 aa13.9□□□□□ -0.18
LSM2-208ENST00000375661 CUL5Q93034 780 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms