RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 RAD54LQ92698 747 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 CCNL1Q9UK58 526 aaPredicted RBP12.91□□□□□ -0.34
MCF2L-202ENST00000375597 FGFR1OPO95684 399 aaKnown RBP12.91□□□□□ -0.34
MCF2L-202ENST00000375597 ERVK-9P63128 1117 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 SNX1Q13596 522 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 C2CD6Q53TS8 623 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 HP1BP3Q5SSJ5 553 aaPredicted RBP12.91□□□□□ -0.34
MCF2L-202ENST00000375597 ELOA2Q8IYF1 753 aaPredicted RBP12.91□□□□□ -0.34
MCF2L-202ENST00000375597 TCP11Q8WWU5 503 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 NEUROG2Q9H2A3 272 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 THRAP3Q9Y2W1 955 aaKnown RBP12.91□□□□□ -0.34
MCF2L-202ENST00000375597 PCDHA1Q9Y5I3 950 aa12.91□□□□□ -0.34
MCF2L-202ENST00000375597 C4AP0C0L4 1744 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 C4BP0C0L5 1744 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 SPDYE3A6NKU9 549 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 SART1O43290 800 aaKnown RBP12.9□□□□□ -0.34
MCF2L-202ENST00000375597 PPP1R12BO60237 982 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-202ENST00000375597 TUBBP07437 444 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 PDHBP11177 359 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 CT47A1Q5JQC4 288 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-202ENST00000375597 EP400NLQ6ZTU2 488 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 ZNF473Q8WTR7 871 aaKnown RBP12.9□□□□□ -0.34
MCF2L-202ENST00000375597 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 HAUS2Q9NVX0 235 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 ARMCX3Q9UH62 379 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-202ENST00000375597 NR2E1Q9Y466 385 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 CLTAP09496 248 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 EXOC3L4Q17RC7 722 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 CCDC65Q8IXS2 484 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 ADGRF4Q8IZF3 695 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 RPGRIP1Q96KN7 1286 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 GCNT4Q9P109 453 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 TNS2Q63HR2 1409 aa12.9□□□□□ -0.34
MCF2L-202ENST00000375597 ANO9A1A5B4 782 aa12.9□□□□□ -0.35
MCF2L-202ENST00000375597 GRID2IPA4D2P6 1211 aa12.9□□□□□ -0.35
MCF2L-202ENST00000375597 TBCAO75347 108 aaKnown RBP12.9□□□□□ -0.35
MCF2L-202ENST00000375597 COG2Q14746 738 aa12.9□□□□□ -0.35
MCF2L-202ENST00000375597 GBP6Q6ZN66 633 aa12.9□□□□□ -0.35
MCF2L-202ENST00000375597 ZNF804AQ7Z570 1209 aa12.9□□□□□ -0.35
MCF2L-202ENST00000375597 NLRP14Q86W24 1093 aa12.9□□□□□ -0.35
MCF2L-202ENST00000375597 SYCP3Q8IZU3 236 aa12.9□□□□□ -0.35
MCF2L-202ENST00000375597 MYCT1Q8N699 235 aa12.9□□□□□ -0.35
MCF2L-202ENST00000375597 TBK1Q9UHD2 729 aa12.9□□□□□ -0.35
MCF2L-202ENST00000375597 NOC2LQ9Y3T9 749 aaKnown RBP12.9□□□□□ -0.35
MCF2L-202ENST00000375597 ZC3H4Q9UPT8 1303 aaKnown RBP12.89□□□□□ -0.35
MCF2L-202ENST00000375597 CFBP00751 764 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 NMT1P30419 496 aaKnown RBP12.89□□□□□ -0.35
MCF2L-202ENST00000375597 ERFP50548 548 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 QPCTQ16769 361 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 MMS22LQ6ZRQ5 1243 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 ZNF571Q7Z3V5 609 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-202ENST00000375597 GIMAP7Q8NHV1 300 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 BAP1Q92560 729 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 ERGIC2Q96RQ1 377 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 STK38LQ9Y2H1 464 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 BCL9O00512 1426 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 XRCC5P13010 732 aaKnown RBP12.89□□□□□ -0.35
MCF2L-202ENST00000375597 CCDC174Q6PII3 467 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 BTBD6Q96KE9 485 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 C7orf25Q9BPX7 421 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 ATP6V0A2Q9Y487 856 aa12.89□□□□□ -0.35
MCF2L-202ENST00000375597 TARSL2A2RTX5 802 aaKnown RBP12.88□□□□□ -0.35
MCF2L-202ENST00000375597 PALM3A6NDB9 673 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-202ENST00000375597 RBAK-RBAKDNI3L0D1 243 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 HSD17B3P37058 310 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 KCNJ1P48048 391 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 GPSM2P81274 684 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 CENPPQ6IPU0 288 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 ZMYND12Q9H0C1 365 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 KCNK9Q9NPC2 374 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 USP40Q9NVE5 1235 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-202ENST00000375597 MYH6P13533 1939 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
MCF2L-202ENST00000375597 PPP1R37O75864 691 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 SERPING1P05155 500 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 FGFR4P22455 802 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 MAP2K2P36507 400 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 AARSP49588 968 aaKnown RBP eCLIP12.88□□□□□ -0.35
MCF2L-202ENST00000375597 PPP1R7Q15435 360 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 SPRED3Q2MJR0 410 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 METTL13Q8N6R0 699 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 WDR66Q8TBY9 1149 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 AJAP1Q9UKB5 411 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-202ENST00000375597 TISP43B9A030 160 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 MED24O75448 989 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 SKAP2O75563 359 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-202ENST00000375597 MYBL1P10243 752 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 YY1P25490 414 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 UBAP2Q5T6F2 1119 aaKnown RBP12.88□□□□□ -0.35
MCF2L-202ENST00000375597 EMBQ6PCB8 327 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
MCF2L-202ENST00000375597 VIPAS39Q9H9C1 493 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 DBNDD1Q9H9R9 158 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
MCF2L-202ENST00000375597 LDHCP07864 332 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 MESDQ14696 234 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms