RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 UBN1Q9NPG3 1134 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 NOVA2Q9UNW9 492 aaKnown RBP10.96□□□□□ -0.65
PTCH1-204ENST00000375290 GOLGA8JA6NMD2 632 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 ASAP2O43150 1006 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 EEF1DP29692 281 aaKnown RBP10.96□□□□□ -0.66
PTCH1-204ENST00000375290 MAPK4P31152 587 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 JADE1Q6IE81 842 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 C10orf88Q9H8K7 445 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 INTUQ9ULD6 942 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 NFU1Q9UMS0 254 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 KCNJ14Q9UNX9 436 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 WDR17Q8IZU2 1322 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 ABCF3Q9NUQ8 709 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 CHEK2O96017 543 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 CPP00450 1065 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 TIMM10P62072 90 aa10.96□□□□□ -0.66
PTCH1-204ENST00000375290 YTHDF3Q7Z739 585 aaKnown RBP10.96□□□□□ -0.66
PTCH1-204ENST00000375290 TRIM56Q9BRZ2 755 aaKnown RBP10.96□□□□□ -0.66
PTCH1-204ENST00000375290 PDE8BO95263 885 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 FAM186BQ8IYM0 893 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 KLC2Q9H0B6 622 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 HESX1Q9UBX0 185 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 TNNI1P19237 187 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 RNASE9P60153 205 aaKnown RBP10.95□□□□□ -0.66
PTCH1-204ENST00000375290 NCAPH2Q6IBW4 605 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 MTBPQ96DY7 904 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 CCDC138Q96M89 665 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 TBC1D23Q9NUY8 699 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 CALB1P05937 261 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 C16orf87Q6PH81 154 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 BBS5Q8N3I7 341 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 DPH5Q9H2P9 285 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 KCND2Q9NZV8 630 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 RTCBQ9Y3I0 505 aaKnown RBP10.95□□□□□ -0.66
PTCH1-204ENST00000375290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTCH1-204ENST00000375290 KLRF2D3W0D1 207 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 KIAA0391O15091 583 aaKnown RBP10.95□□□□□ -0.66
PTCH1-204ENST00000375290 DEAF1O75398 565 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-204ENST00000375290 LDHAP00338 332 aaKnown RBP10.95□□□□□ -0.66
PTCH1-204ENST00000375290 TNFAIP1Q13829 316 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 TBC1D9BQ66K14 1250 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 DHX40Q8IX18 779 aaKnown RBP10.95□□□□□ -0.66
PTCH1-204ENST00000375290 PI4K2BQ8TCG2 481 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 SIKE1Q9BRV8 207 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 AMNQ9BXJ7 453 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 RASA4BC9J798 803 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 RASA4O43374 803 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 EIF4A3P38919 411 aaKnown RBP10.95□□□□□ -0.66
PTCH1-204ENST00000375290 SNF8Q96H20 258 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 UIMC1Q96RL1 719 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 C16orf96A6NNT2 1141 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 SLFN12LQ6IEE8 588 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 SNRPFP62306 86 aaKnown RBP10.95□□□□□ -0.66
PTCH1-204ENST00000375290 PAGE5Q96GU1 130 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 VPS39Q96JC1 886 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 CD2APQ9Y5K6 639 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 STAT2P52630 851 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 PMS2P54278 862 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 ZNF354CQ86Y25 554 aa10.95□□□□□ -0.66
PTCH1-204ENST00000375290 DNAJC17Q9NVM6 304 aaKnown RBP10.95□□□□□ -0.66
PTCH1-204ENST00000375290 PITPNM2Q9BZ72 1349 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 PPP2R5CQ13362 524 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 PRUNE1Q86TP1 453 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 XAB2Q9HCS7 855 aaKnown RBP10.94□□□□□ -0.66
PTCH1-204ENST00000375290 C4orf22Q6V702 233 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 DYMQ7RTS9 669 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 PARVGQ9HBI0 331 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 PALLDQ8WX93 1383 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 PAMP19021 973 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 YWHAGP61981 247 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTCH1-204ENST00000375290 C2orf54Q08AI8 447 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 DDX56Q9NY93 547 aaKnown RBP10.94□□□□□ -0.66
PTCH1-204ENST00000375290 PNPLA6Q8IY17 1366 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 ENC1O14682 589 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 MMGT1Q8N4V1 131 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 BRIP1Q9BX63 1249 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 ALX1Q15699 326 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 KDM7AQ6ZMT4 941 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 FAM210AQ96ND0 272 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 TIPINQ9BVW5 301 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 KDM4CQ9H3R0 1056 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 SUFUQ9UMX1 484 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 SNX12Q9UMY4 172 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 HAUS5O94927 633 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 ADCK5Q3MIX3 580 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 ACCSQ96QU6 501 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 TLK1Q9UKI8 766 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 WDR46O15213 610 aaKnown RBP10.94□□□□□ -0.66
PTCH1-204ENST00000375290 APOA1P02647 267 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 KRT10P13645 584 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 TAC1P20366 129 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 ATP2B4P23634 1241 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 ZAP70P43403 619 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 MED21Q13503 144 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 ART3Q13508 389 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 BEND6Q5SZJ8 279 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-204ENST00000375290 SPATA4Q8NEY3 305 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 ARHGEF9O43307 516 aa10.94□□□□□ -0.66
PTCH1-204ENST00000375290 FGGP02679 453 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms