RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 PAK2Q13177 524 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 SEMA3FQ13275 785 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 MTMR1Q13613 665 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 PKN1Q16512 942 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 CTC1Q2NKJ3 1217 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 PAN2Q504Q3 1202 aaKnown RBP16.21■□□□□ 0.19
PTCH1-202ENST00000375271 NAALADL2Q58DX5 795 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 FBXO47Q5MNV8 452 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 RNF135Q8IUD6 432 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 NPAS4Q8IUM7 802 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 CMTR2Q8IYT2 770 aaKnown RBP16.21■□□□□ 0.19
PTCH1-202ENST00000375271 MICAL1Q8TDZ2 1067 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 P2RX5Q93086 422 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 PRRX2Q99811 253 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 LZTS2Q9BRK4 669 aa16.21■□□□□ 0.19
PTCH1-202ENST00000375271 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
PTCH1-202ENST00000375271 SUPT16HQ9Y5B9 1047 aaKnown RBP16.21■□□□□ 0.19
PTCH1-202ENST00000375271 PIK3CDO00329 1044 aa16.2■□□□□ 0.18
PTCH1-202ENST00000375271 DGKIO75912 1065 aa16.2■□□□□ 0.18
PTCH1-202ENST00000375271 SRGAP2BP0DMP2 458 aa16.2■□□□□ 0.18
PTCH1-202ENST00000375271 CD52P31358 61 aa16.2■□□□□ 0.18
PTCH1-202ENST00000375271 LTBRP36941 435 aa16.2■□□□□ 0.18
PTCH1-202ENST00000375271 ADAM17P78536 824 aa16.2■□□□□ 0.18
PTCH1-202ENST00000375271 TROAPQ12815 778 aa16.2■□□□□ 0.18
PTCH1-202ENST00000375271 HERC4Q5GLZ8 1057 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-202ENST00000375271 SPZ1Q9BXG8 430 aa16.2■□□□□ 0.18
PTCH1-202ENST00000375271 PSTPIP2Q9H939 334 aa16.2■□□□□ 0.18
PTCH1-202ENST00000375271 PLAGL2Q9UPG8 496 aa16.2■□□□□ 0.18
PTCH1-202ENST00000375271 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 CCDC69A6NI79 296 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 TBX10O75333 385 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 DDAH1O94760 285 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 CYP21A2P08686 494 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 GTF2F1P35269 517 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTCH1-202ENST00000375271 DLX2Q07687 328 aaPredicted RBP16.19■□□□□ 0.18
PTCH1-202ENST00000375271 MGAT3Q09327 533 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 EDAQ92838 391 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 PBXIP1Q96AQ6 731 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 SDF4Q9BRK5 362 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 JPH1Q9HDC5 661 aaPredicted RBP16.19■□□□□ 0.18
PTCH1-202ENST00000375271 AAASQ9NRG9 546 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 PCDHB12Q9Y5F1 795 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 TRPV2Q9Y5S1 764 aa16.19■□□□□ 0.18
PTCH1-202ENST00000375271 MRPL42Q9Y6G3 142 aaKnown RBP16.19■□□□□ 0.18
PTCH1-202ENST00000375271 MYO7AQ13402 2215 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 E7EWF7 191 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 SCG2P13521 617 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 NRIP1P48552 1158 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 PTPN5P54829 565 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 ADAM15Q13444 863 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 SLC35G1Q2M3R5 365 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 ODR4Q5SWX8 454 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 RBM23Q86U06 439 aaKnown RBP16.18■□□□□ 0.18
PTCH1-202ENST00000375271 ZNF654Q8IZM8 581 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 POF1BQ8WVV4 589 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 ZNF689Q96CS4 500 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-202ENST00000375271 MAP3K14Q99558 947 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 SQORQ9Y6N5 450 aa16.18■□□□□ 0.18
PTCH1-202ENST00000375271 MBLAC1A4D2B0 266 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-202ENST00000375271 MAFGO15525 162 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 LINC01565O15544 149 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 PPFIA3O75145 1194 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 KCNA2P16389 499 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 TMEM62Q0P6H9 643 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 NFX1Q12986 1120 aaKnown RBP16.17■□□□□ 0.18
PTCH1-202ENST00000375271 ZBTB33Q86T24 672 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 EFHBQ8N7U6 833 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 KLHL23Q8NBE8 558 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 MYL10Q9BUA6 226 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 TLE6Q9H808 572 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 RC3H2Q9HBD1 1191 aaKnown RBP16.17■□□□□ 0.18
PTCH1-202ENST00000375271 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 GINS2Q9Y248 185 aa16.17■□□□□ 0.18
PTCH1-202ENST00000375271 TTC3P53804 2025 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 ATG2AQ2TAZ0 1938 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 DENND3A2RUS2 1198 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 TMEM221A6NGB7 291 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 M0R296 226 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 MEIS2O14770 477 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 ITGB1P05556 798 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 CALM1P0DP23 149 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 CALM2P0DP24 149 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 CALM3P0DP25 149 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 INSRRP14616 1297 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 SMARCA1P28370 1054 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 TTC22Q5TAA0 569 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 TMTC2Q8N394 836 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 SLC9A2Q9UBY0 812 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 PADI3Q9ULW8 664 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 TELO2Q9Y4R8 837 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 PCDHB7Q9Y5E2 793 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 C5orf42Q9H799 3197 aa16.16■□□□□ 0.18
PTCH1-202ENST00000375271 GSTTP1A0A1W2PQM5 241 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 ATP9AO75110 1047 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 IGHDP01880 384 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 ITGB5P18084 799 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 KRT76Q01546 638 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 UBE2SQ16763 222 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 TRIM67Q6ZTA4 783 aa16.15■□□□□ 0.18
PTCH1-202ENST00000375271 HEATR3Q7Z4Q2 680 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms