RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 COASYQ13057 564 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 SUPT20HL1Q3ZLR7 823 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 SULF1Q8IWU6 871 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 GPR101Q96P66 508 aaPredicted RBP21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 HOXA13P31271 388 aaPredicted RBP21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 KCTD2Q14681 263 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 EFCAB13Q8IY85 973 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 MMS19Q96T76 1030 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 RRP15Q9Y3B9 282 aaKnown RBP21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 USP17L15C9J2P7 530 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 USP17L13C9JLJ4 530 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 USP17L11C9JVI0 530 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 USP17L18D6R9N7 530 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 USP17L22D6RA61 530 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 USP17L17D6RBQ6 530 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 USP17L19D6RCP7 530 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 USP17L20D6RJB6 530 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 NR3C1P04150 777 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 CCZ1BP86790 482 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 CCZ1P86791 482 aaPredicted RBP21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 IL9RQ01113 521 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 USP17L24Q0WX57 530 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 USP17L6PQ6QN14 398 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 ENGASEQ8NFI3 743 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 RAB3IPQ96QF0 476 aaPredicted RBP21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 MYO3BQ8WXR4 1341 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 HIP1RO75146 1068 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 TRIM9Q9C026 710 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 TAF6LQ9Y6J9 622 aa21.15■□□□□ 0.98
TGFBR1-201ENST00000374990 CHGBP05060 677 aa21.14■□□□□ 0.98
TGFBR1-201ENST00000374990 E4F1Q66K89 784 aaPredicted RBP21.14■□□□□ 0.98
TGFBR1-201ENST00000374990 SFR1Q86XK3 245 aa21.14■□□□□ 0.98
TGFBR1-201ENST00000374990 CAPN11Q9UMQ6 739 aa21.14■□□□□ 0.98
TGFBR1-201ENST00000374990 A0A087WUV0 522 aaPredicted RBP21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 CCDC160A6NGH7 325 aa21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 CTTNQ14247 550 aaKnown RBP21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 NCAPG2Q86XI2 1143 aa21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 RTKN2Q8IZC4 609 aa21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 NSMCE1Q8WV22 266 aa21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 KCNF1Q9H3M0 494 aa21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 CD163L1Q9NR16 1453 aa21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 KNOP1Q1ED39 458 aaKnown RBP21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 CTDNEP1O95476 244 aa21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 NKX1-1Q15270 411 aaPredicted RBP21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 GEN1Q17RS7 908 aa21.14■□□□□ 0.97
TGFBR1-201ENST00000374990 NR1D1P20393 614 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 SURF1Q15526 300 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 TRIM50Q86XT4 487 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 HAUS2Q9NVX0 235 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 ODF2LQ9ULJ1 636 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 SLC8A1P32418 973 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 CCDC38Q502W7 563 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 ZNF408Q9H9D4 720 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 E9PMD0 336 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 PODXLO00592 558 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 GIPC1O14908 333 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 RAD17O75943 681 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 CCND2P30279 289 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 LRRC8CQ8TDW0 803 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 KAZALD1Q96I82 304 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 VCX3BQ9H321 246 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 BCAP29Q9UHQ4 241 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 DNAJC12Q9UKB3 198 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 MRFAP1Q9Y605 127 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 ZNF233A6NK53 670 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 XPOTO43592 962 aaKnown RBP21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 CTNND1O60716 968 aaKnown RBP21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 XXYLT1Q8NBI6 393 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 DPF2Q92785 391 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 RILPQ96NA2 401 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 PSAPP07602 524 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 DR1Q01658 176 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 QRICH1Q2TAL8 776 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 MCPH1Q8NEM0 835 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 RIOK1Q9BRS2 568 aaKnown RBP21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 PTPN22Q9Y2R2 807 aa21.13■□□□□ 0.97
TGFBR1-201ENST00000374990 CLTCQ00610 1675 aaKnown RBP21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 ITIH6Q6UXX5 1313 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 SART1O43290 800 aaKnown RBP21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 GMNNO75496 209 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 SLFN12LQ6IEE8 588 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 MAP3K14Q99558 947 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 USP17L10C9JJH3 530 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 JAK3P52333 1124 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 CLNS1AP54105 237 aaKnown RBP21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 RWDD2BP57060 319 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 SF3A3Q12874 501 aaKnown RBP eCLIP21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 RINT1Q6NUQ1 792 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 ADSSL1Q8N142 457 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 TBC1D22BQ9NU19 505 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 PP2D1A8MPX8 630 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 F5H6K3 240 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 TADA3O75528 432 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 SLC12A2P55011 1212 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 KLRC3Q07444 240 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 ARHGEF18Q6ZSZ5 1173 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 INO80B-WBP1J3KQ70 363 aa21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 RC3H1Q5TC82 1133 aaKnown RBP21.12■□□□□ 0.97
TGFBR1-201ENST00000374990 KAZNQ674X7 775 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms