RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ZNF444Q8N0Y2 327 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-203ENST00000374877 GUF1Q8N442 669 aaKnown RBP12.17□□□□□ -0.46
CCDC40-203ENST00000374877 OR2W6PQ8NHA6 318 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 TAF4BQ92750 862 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 BLOC1S4Q9NUP1 217 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 TRAF5O00463 557 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 RHBDL3P58872 404 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 LRRC55Q6ZSA7 311 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 LARGE2Q8N3Y3 721 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 TEKT1Q969V4 418 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 PACSIN1Q9BY11 444 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 TAOK3Q9H2K8 898 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 CD248Q9HCU0 757 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 ADAMTS1Q9UHI8 967 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 ROBO3Q96MS0 1386 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 PSME4Q14997 1843 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 KCNK3O14649 394 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 TLR2O60603 784 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 SERPING1P05155 500 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 IBSPP21815 317 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-203ENST00000374877 CDC37Q16543 378 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-203ENST00000374877 MREGQ8N565 214 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 PROCA1Q8NCQ7 364 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-203ENST00000374877 ZMYND12Q9H0C1 365 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 POTEMA6NI47 508 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 YDJCA8MPS7 323 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 RDXP35241 583 aaKnown RBP12.16□□□□□ -0.46
CCDC40-203ENST00000374877 ITGB3BPQ13352 177 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-203ENST00000374877 NAB2Q15742 525 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 COBLL1Q53SF7 1204 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 ODF2Q5BJF6 829 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 CD302Q8IX05 232 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 INPP4AQ96PE3 977 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-203ENST00000374877 TMEM47Q9BQJ4 181 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 CXorf56Q9H5V9 222 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 CEP72Q9P209 647 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 A0A087X0T9 212 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 PVALEFA0A1B0GWK0 134 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 GCOM1H8Y6P7 765 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-203ENST00000374877 FAM107AO95990 144 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 SSBP05455 408 aaKnown RBP eCLIP12.16□□□□□ -0.46
CCDC40-203ENST00000374877 FAM228BP0C875 321 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 MYZAPP0CAP1 466 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 GNA11P29992 359 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 CALCRLQ16602 461 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 NIM1KQ8IY84 436 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 TEX11Q8IYF3 940 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 DDX12PQ92771 950 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 ZDHHC15Q96MV8 337 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 GOLPH3Q9H4A6 298 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 ZNF277Q9NRM2 450 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-203ENST00000374877 TMEM260Q9NX78 707 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 TBC1D7Q9P0N9 293 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 PPP1R1BQ9UD71 204 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-203ENST00000374877 SERPINA10Q9UK55 444 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 ZNRF3Q9ULT6 936 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 LAMB1P07942 1786 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 FER1L6Q2WGJ9 1857 aa12.16□□□□□ -0.46
CCDC40-203ENST00000374877 GRID2IPA4D2P6 1211 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 KLHL30Q0D2K2 578 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 MEI1Q5TIA1 1274 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 C12orf60Q5U649 245 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 DDX42Q86XP3 938 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCDC40-203ENST00000374877 CCDC13Q8IYE1 715 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 FAM133AQ8N9E0 248 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 SNX29Q8TEQ0 813 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 PNMA5Q96PV4 448 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 TAF1DQ9H5J8 278 aaPredicted RBP12.15□□□□□ -0.46
CCDC40-203ENST00000374877 KCNQ5Q9NR82 932 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 SEC63Q9UGP8 760 aaKnown RBP12.15□□□□□ -0.46
CCDC40-203ENST00000374877 COL4A3BPQ9Y5P4 624 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 ABCB11O95342 1321 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 CCDC121Q6ZUS5 278 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 ARFGAP2Q8N6H7 521 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 USP38Q8NB14 1042 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 VCPKMTQ9H867 229 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 STK17AQ9UEE5 414 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 SCN9AQ15858 1988 aa12.15□□□□□ -0.46
CCDC40-203ENST00000374877 MYH1P12882 1939 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 PALM3A6NDB9 673 aaPredicted RBP12.15□□□□□ -0.47
CCDC40-203ENST00000374877 RBAK-RBAKDNI3L0D1 243 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 BACH1O14867 736 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 CEP104O60308 925 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 VIL1P09327 827 aaKnown RBP12.15□□□□□ -0.47
CCDC40-203ENST00000374877 CTNNA1P35221 906 aaKnown RBP12.15□□□□□ -0.47
CCDC40-203ENST00000374877 HSD17B3P37058 310 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 CRKP46108 304 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 MMP14P50281 582 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 CDR1P51861 262 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 GSCP56915 257 aaPredicted RBP12.15□□□□□ -0.47
CCDC40-203ENST00000374877 ERVK-9P63128 1117 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 RPS6KA1Q15418 735 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 SLC18A3Q16572 532 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 TMEM266Q2M3C6 531 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 RSBN1LQ6PCB5 846 aaPredicted RBP12.15□□□□□ -0.47
CCDC40-203ENST00000374877 USP17L2Q6R6M4 530 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 YTHDF3Q7Z739 585 aaKnown RBP12.15□□□□□ -0.47
CCDC40-203ENST00000374877 NELFCDQ8IXH7 590 aa12.15□□□□□ -0.47
CCDC40-203ENST00000374877 MYOCDQ8IZQ8 938 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms