RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 ARFGAP2Q8N6H7 521 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 GMCL1P1Q8NEA9 526 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBXN11-204ENST00000374217 MAGEC3Q8TD91 643 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 ACER1Q8TDN7 264 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 DCAF4Q8WV16 495 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 ZNF408Q9H9D4 720 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 HMGB1P1B2RPK0 211 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-204ENST00000374217 TRIM21P19474 475 aaKnown RBP16.47■□□□□ 0.23
UBXN11-204ENST00000374217 NAP1L1P55209 391 aaKnown RBP16.47■□□□□ 0.23
UBXN11-204ENST00000374217 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
UBXN11-204ENST00000374217 TTMPQ5BVD1 217 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 SRBD1Q8N5C6 995 aaKnown RBP16.47■□□□□ 0.23
UBXN11-204ENST00000374217 ERGIC2Q96RQ1 377 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 V9GY48 417 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-204ENST00000374217 ATAD5Q96QE3 1844 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 PAK2Q13177 524 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 PTGDRQ13258 359 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 PKN1Q16512 942 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 CCDC181Q5TID7 509 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 KCTD1Q719H9 257 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 P3H4Q92791 437 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 LACRTQ9GZZ8 138 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 CUEDC2Q9H467 287 aa16.47■□□□□ 0.23
UBXN11-204ENST00000374217 GPBP1L1Q9HC44 474 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-204ENST00000374217 GOLGA6L7A0A1B0GV03 622 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 TRAF5O00463 557 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 ZMYND10O75800 440 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 PPP1R37O75864 691 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 RHOBTB3O94955 611 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 NDUFB10O96000 172 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 PTPRAP18433 802 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 CASP1P29466 404 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 LSP1P33241 339 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 ACTN3Q08043 901 aaPredicted RBP16.46■□□□□ 0.23
UBXN11-204ENST00000374217 FUT2Q10981 343 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 IKQ13123 557 aaPredicted RBP16.46■□□□□ 0.23
UBXN11-204ENST00000374217 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
UBXN11-204ENST00000374217 PPP4R3AQ6IN85 833 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 GSPT2Q8IYD1 628 aaKnown RBP16.46■□□□□ 0.23
UBXN11-204ENST00000374217 IQCKQ8N0W5 287 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 SPICE1Q8N0Z3 855 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 RNF10Q8N5U6 811 aaKnown RBP16.46■□□□□ 0.23
UBXN11-204ENST00000374217 WHAMMQ8TF30 809 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 GMCL1Q96IK5 515 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 CCDC42Q96M95 316 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 OSBPL9Q96SU4 736 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 LRRC1Q9BTT6 524 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 VPS54Q9P1Q0 977 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 ZHX2Q9Y6X8 837 aa16.46■□□□□ 0.23
UBXN11-204ENST00000374217 DOCK1Q14185 1865 aa16.46■□□□□ 0.22
UBXN11-204ENST00000374217 PJA2O43164 708 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 BMP3P12645 472 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 VGLL4Q14135 290 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 PREPLQ4J6C6 727 aaPredicted RBP16.45■□□□□ 0.22
UBXN11-204ENST00000374217 COBLL1Q53SF7 1204 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 CFAP58Q5T655 872 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 NAA35Q5VZE5 725 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 C8orf74Q6P047 294 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 ANKRD13AQ8IZ07 590 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 GIMAP7Q8NHV1 300 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 CCDC47Q96A33 483 aaKnown RBP16.45■□□□□ 0.22
UBXN11-204ENST00000374217 GDAP1L1Q96MZ0 367 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 GDF3Q9NR23 364 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 ABCB11O95342 1321 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 hCG_1642624A0A1W2PR95 340 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 GRID2IPA4D2P6 1211 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 USP17L10C9JJH3 530 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 ZNF185O15231 689 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 FAM107AO95990 144 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 SPP2Q13103 211 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 WLSQ5T9L3 541 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.45■□□□□ 0.22
UBXN11-204ENST00000374217 GIMAP8Q8ND71 665 aaPredicted RBP16.45■□□□□ 0.22
UBXN11-204ENST00000374217 ZNF280CQ8ND82 737 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 RRP36Q96EU6 259 aaKnown RBP16.45■□□□□ 0.22
UBXN11-204ENST00000374217 TRIM47Q96LD4 638 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 MTRQ99707 1265 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 TUBGCP2Q9BSJ2 902 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 UBA5Q9GZZ9 404 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 BLZF1Q9H2G9 400 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 SEC63Q9UGP8 760 aaKnown RBP16.45■□□□□ 0.22
UBXN11-204ENST00000374217 DMGDHQ9UI17 866 aaKnown RBP16.45■□□□□ 0.22
UBXN11-204ENST00000374217 PLAGL2Q9UPG8 496 aa16.45■□□□□ 0.22
UBXN11-204ENST00000374217 CNTNAP5Q8WYK1 1306 aa16.44■□□□□ 0.22
UBXN11-204ENST00000374217 RCCD1A6NED2 376 aa16.44■□□□□ 0.22
UBXN11-204ENST00000374217 STAT6P42226 847 aa16.44■□□□□ 0.22
UBXN11-204ENST00000374217 PTGISQ16647 500 aa16.44■□□□□ 0.22
UBXN11-204ENST00000374217 CFAP221Q4G0U5 840 aa16.44■□□□□ 0.22
UBXN11-204ENST00000374217 FKBP15Q5T1M5 1219 aa16.44■□□□□ 0.22
UBXN11-204ENST00000374217 CHADLQ6NUI6 762 aa16.44■□□□□ 0.22
UBXN11-204ENST00000374217 TTI2Q6NXR4 508 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms