RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 MAFGO15525 162 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 MSCO60682 206 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 GAS7O60861 476 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 ASGR1P07306 291 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 GCFC2P16383 781 aaKnown RBP10.75□□□□□ -0.69
ITM2A-201ENST00000373298 TRAPPC10P48553 1259 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 ACTR2P61160 394 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 NKX3-2P78367 333 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 LAMC2Q13753 1193 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 NEDD9Q14511 834 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 UGCGQ16739 394 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 RILPL1Q5EBL4 403 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 KCNV1Q6PIU1 500 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 PPTC7Q8NI37 304 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 KAT2BQ92831 832 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 CDHR1Q96JP9 859 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 AP5M1Q9H0R1 490 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 SLC9A2Q9UBY0 812 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 MYH9P35579 1960 aaKnown RBP10.75□□□□□ -0.69
ITM2A-201ENST00000373298 ALPK3Q96L96 1907 aa10.75□□□□□ -0.69
ITM2A-201ENST00000373298 A0A087WWV3 80 aa10.74□□□□□ -0.69
ITM2A-201ENST00000373298 PP2D1A8MPX8 630 aa10.74□□□□□ -0.69
ITM2A-201ENST00000373298 NKRFO15226 690 aaKnown RBP eCLIP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 MYL3P08590 195 aa10.74□□□□□ -0.69
ITM2A-201ENST00000373298 MARCKSP29966 332 aaPredicted RBP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 CDC25AP30304 524 aa10.74□□□□□ -0.69
ITM2A-201ENST00000373298 TCF7P36402 384 aaPredicted RBP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 ACLYP53396 1101 aa10.74□□□□□ -0.69
ITM2A-201ENST00000373298 PURAQ00577 322 aaKnown RBP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 HIC1Q14526 733 aa10.74□□□□□ -0.69
ITM2A-201ENST00000373298 UTP14CQ5TAP6 766 aaKnown RBP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 ABHD15Q6UXT9 468 aa10.74□□□□□ -0.69
ITM2A-201ENST00000373298 UBE2Q1Q7Z7E8 422 aa10.74□□□□□ -0.69
ITM2A-201ENST00000373298 CCDC60Q8IWA6 550 aaPredicted RBP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 PAWRQ96IZ0 340 aaKnown RBP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 C16orf70Q9BSU1 422 aa10.74□□□□□ -0.69
ITM2A-201ENST00000373298 ZSCAN16Q9H4T2 348 aaPredicted RBP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 TTC12Q9H892 705 aaPredicted RBP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 WRAP73Q9P2S5 460 aaPredicted RBP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 NOL7Q9UMY1 257 aaKnown RBP10.74□□□□□ -0.69
ITM2A-201ENST00000373298 Q9Y3F1 56 aa10.74□□□□□ -0.69
ITM2A-201ENST00000373298 TMEM150BA6NC51 233 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 LGALS2P05162 132 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 OR52Z1P0C646 297 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 HOXD8P13378 290 aaPredicted RBP10.73□□□□□ -0.69
ITM2A-201ENST00000373298 ATP4AP20648 1035 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 CST5P28325 142 aaPredicted RBP10.73□□□□□ -0.69
ITM2A-201ENST00000373298 TECP42680 631 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 CHMP4BP1P59074 171 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 FOXK1P85037 733 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 ATP2C1P98194 919 aaPredicted RBP10.73□□□□□ -0.69
ITM2A-201ENST00000373298 TRMT1LQ7Z2T5 733 aaKnown RBP10.73□□□□□ -0.69
ITM2A-201ENST00000373298 ZBTB10Q96DT7 871 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 SDF4Q9BRK5 362 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 GDPD2Q9HCC8 539 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 A0A1W2PQ45 241 aaPredicted RBP10.73□□□□□ -0.69
ITM2A-201ENST00000373298 A0A1W2PQY0 241 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 DNM1LO00429 736 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 NOP56O00567 594 aaKnown RBP10.73□□□□□ -0.69
ITM2A-201ENST00000373298 ZBTB39O15060 712 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 TBX3O15119 743 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 ZNF862O60290 1169 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 ATG7O95352 703 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 COL6A1P12109 1028 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 MARK3P27448 753 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 ECM1Q16610 540 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 SPECC1Q5M775 1068 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 SWSAP1Q6NVH7 229 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 USP49Q70CQ1 688 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 RNF180Q86T96 592 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 FAM20AQ96MK3 541 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 CLIC6Q96NY7 704 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 RIT2Q99578 217 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 SH2D3AQ9BRG2 576 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 TEKT3Q9BXF9 490 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 SENP6Q9GZR1 1112 aaPredicted RBP10.73□□□□□ -0.69
ITM2A-201ENST00000373298 RNPEPQ9H4A4 650 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 DISC1Q9NRI5 854 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 TBC1D22BQ9NU19 505 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 RGL1Q9NZL6 768 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 PHF24Q9UPV7 400 aa10.73□□□□□ -0.69
ITM2A-201ENST00000373298 ELP1O95163 1332 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 IGKV6D-21A0A0A0MT36 114 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 VWA3AA6NCI4 1184 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 PPFIA4O75335 1185 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 SUPT20HL2P0C7V6 817 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 CPT1AP50416 773 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 CYP4A11Q02928 519 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 PPP2R5CQ13362 524 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 DGKDQ16760 1214 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 NCAPH2Q6IBW4 605 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 ZNF746Q6NUN9 644 aaPredicted RBP10.72□□□□□ -0.69
ITM2A-201ENST00000373298 LINC00301Q8NCQ3 95 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 ARRDC4Q8NCT1 418 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 GIMAP8Q8ND71 665 aaPredicted RBP10.72□□□□□ -0.69
ITM2A-201ENST00000373298 BANK1Q8NDB2 785 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 SEPT1Q8WYJ6 367 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 KCTD12Q96CX2 325 aaKnown RBP10.72□□□□□ -0.69
ITM2A-201ENST00000373298 SPC25Q9HBM1 224 aa10.72□□□□□ -0.69
ITM2A-201ENST00000373298 PCDHA12Q9UN75 941 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms