RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TSGA10Q9BZW7 698 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 CEP72Q9P209 647 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 ZBTB12Q9Y330 459 aaPredicted RBP26.26■■□□□ 1.79
CDK9-201ENST00000373264 TACC1O75410 805 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 SLC9A1P19634 815 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 MOXD1Q6UVY6 613 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 TRIM58Q8NG06 486 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 PACSIN1Q9BY11 444 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 PDGFDQ9GZP0 370 aaPredicted RBP26.26■■□□□ 1.79
CDK9-201ENST00000373264 CASP4P49662 377 aa26.25■■□□□ 1.79
CDK9-201ENST00000373264 SFMBT2Q5VUG0 894 aa26.25■■□□□ 1.79
CDK9-201ENST00000373264 IQCDQ96DY2 449 aa26.25■■□□□ 1.79
CDK9-201ENST00000373264 EIF2AK1Q9BQI3 630 aaKnown RBP26.25■■□□□ 1.79
CDK9-201ENST00000373264 JRKLQ9Y4A0 524 aa26.25■■□□□ 1.79
CDK9-201ENST00000373264 ATRNL1Q5VV63 1379 aa26.25■■□□□ 1.79
CDK9-201ENST00000373264 KSR1Q8IVT5 923 aa26.25■■□□□ 1.79
CDK9-201ENST00000373264 IGLV3-22A0A075B6J6 115 aa26.24■■□□□ 1.79
CDK9-201ENST00000373264 CLIC2O15247 247 aa26.24■■□□□ 1.79
CDK9-201ENST00000373264 MMP14P50281 582 aa26.24■■□□□ 1.79
CDK9-201ENST00000373264 CC2D2BQ6DHV5 1058 aa26.24■■□□□ 1.79
CDK9-201ENST00000373264 MIGA2Q7L4E1 593 aa26.24■■□□□ 1.79
CDK9-201ENST00000373264 OSBPL9Q96SU4 736 aa26.24■■□□□ 1.79
CDK9-201ENST00000373264 GLIS2Q9BZE0 524 aaPredicted RBP26.24■■□□□ 1.79
CDK9-201ENST00000373264 VPS18Q9P253 973 aa26.24■■□□□ 1.79
CDK9-201ENST00000373264 PITPNM2Q9BZ72 1349 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 A0A087X0T9 212 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 ENTPD3O75355 529 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 AKAP3O75969 853 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 FAM228BP0C875 321 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 NAP1L1P55209 391 aaKnown RBP26.23■■□□□ 1.79
CDK9-201ENST00000373264 FOXR2Q6PJQ5 311 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 ERMNQ8TAM6 284 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 MS4A14Q96JA4 679 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.23■■□□□ 1.79
CDK9-201ENST00000373264 GANQ9H2C0 597 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 HDAC9Q9UKV0 1011 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 CETN3O15182 167 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 MARSP56192 900 aaKnown RBP26.23■■□□□ 1.79
CDK9-201ENST00000373264 TUBB4BP68371 445 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 MAPK8IP2Q13387 824 aaPredicted RBP26.23■■□□□ 1.79
CDK9-201ENST00000373264 KNOP1Q1ED39 458 aaKnown RBP26.23■■□□□ 1.79
CDK9-201ENST00000373264 BTNL9Q6UXG8 535 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 FLAD1Q8NFF5 587 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 ADAMTS1Q9UHI8 967 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 ADAM21Q9UKJ8 722 aa26.23■■□□□ 1.79
CDK9-201ENST00000373264 FAM170AA1A519 330 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 NPM3O75607 178 aaKnown RBP26.22■■□□□ 1.79
CDK9-201ENST00000373264 STAT2P52630 851 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 CKAP4Q07065 602 aaKnown RBP26.22■■□□□ 1.79
CDK9-201ENST00000373264 SLC9C1Q4G0N8 1177 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 EPM2AIP1Q7L775 607 aaPredicted RBP26.22■■□□□ 1.79
CDK9-201ENST00000373264 ZC3H3Q8IXZ2 948 aaKnown RBP26.22■■□□□ 1.79
CDK9-201ENST00000373264 TLR10Q9BXR5 811 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 FBXO28Q9NVF7 368 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 AJAP1Q9UKB5 411 aaPredicted RBP26.22■■□□□ 1.79
CDK9-201ENST00000373264 FAN1Q9Y2M0 1017 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 TBX3O15119 743 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 CIITAP33076 1130 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 TNNT3P45378 269 aaPredicted RBP26.22■■□□□ 1.79
CDK9-201ENST00000373264 SLC7A5Q01650 507 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 DCAF17Q5H9S7 520 aaPredicted RBP26.22■■□□□ 1.79
CDK9-201ENST00000373264 DPY19L2P1Q6NXN4 242 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 TPH2Q8IWU9 490 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 LRRC1Q9BTT6 524 aa26.22■■□□□ 1.79
CDK9-201ENST00000373264 PACSIN2Q9UNF0 486 aaPredicted RBP26.22■■□□□ 1.79
CDK9-201ENST00000373264 FOSP01100 380 aaPredicted RBP26.21■■□□□ 1.79
CDK9-201ENST00000373264 EPS15P42566 896 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 ZC2HC1CQ53FD0 456 aaPredicted RBP26.21■■□□□ 1.79
CDK9-201ENST00000373264 KLHDC7AQ5VTJ3 777 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.21■■□□□ 1.79
CDK9-201ENST00000373264 CCDC102AQ96A19 550 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 FAM20AQ96MK3 541 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 PLEKHA4Q9H4M7 779 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 DMGDHQ9UI17 866 aaKnown RBP26.21■■□□□ 1.79
CDK9-201ENST00000373264 ASTN1O14525 1302 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 PJA2O43164 708 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 GCNT3O95395 438 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 SERPING1P05155 500 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 KLRC1P26715 233 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 WRAP73Q9P2S5 460 aaPredicted RBP26.21■■□□□ 1.79
CDK9-201ENST00000373264 RABGAP1Q9Y3P9 1069 aa26.21■■□□□ 1.79
CDK9-201ENST00000373264 SSU72P8A0A1W2PR75 194 aa26.2■■□□□ 1.78
CDK9-201ENST00000373264 GNA14O95837 355 aa26.2■■□□□ 1.78
CDK9-201ENST00000373264 NMT1P30419 496 aaKnown RBP26.2■■□□□ 1.78
CDK9-201ENST00000373264 EDRF1Q3B7T1 1238 aa26.2■■□□□ 1.78
CDK9-201ENST00000373264 GJB7Q6PEY0 223 aa26.2■■□□□ 1.78
CDK9-201ENST00000373264 DYDC2Q96IM9 177 aa26.2■■□□□ 1.78
CDK9-201ENST00000373264 SPDYE2BA6NHP3 402 aa26.2■■□□□ 1.78
CDK9-201ENST00000373264 FTCDO95954 541 aa26.2■■□□□ 1.78
CDK9-201ENST00000373264 SPDYE6P0CI01 402 aa26.2■■□□□ 1.78
CDK9-201ENST00000373264 RIN2Q8WYP3 895 aaPredicted RBP26.2■■□□□ 1.78
CDK9-201ENST00000373264 CNKSR1Q969H4 720 aa26.2■■□□□ 1.78
CDK9-201ENST00000373264 TMEM39BQ9GZU3 492 aa26.2■■□□□ 1.78
CDK9-201ENST00000373264 PTPROQ16827 1216 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 TCERG1LQ5VWI1 586 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 RINT1Q6NUQ1 792 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 SPATA4Q8NEY3 305 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 EDEM3Q9BZQ6 932 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 VEZTQ9HBM0 779 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 ARMCX3Q9UH62 379 aaPredicted RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms