RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 GAS2L1Q99501 681 aaPredicted RBP17.09■□□□□ 0.33
C9orf16-201ENST00000372994 LARP6Q9BRS8 491 aaKnown RBP17.09■□□□□ 0.33
C9orf16-201ENST00000372994 AZI2Q9H6S1 392 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 VPS54Q9P1Q0 977 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 REV3LO60673 3130 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 IGKV6D-21A0A0A0MT36 114 aa17.08■□□□□ 0.32
C9orf16-201ENST00000372994 DHX15O43143 795 aaKnown RBP17.08■□□□□ 0.32
C9orf16-201ENST00000372994 CIITAP33076 1130 aa17.08■□□□□ 0.32
C9orf16-201ENST00000372994 STAT5BP51692 787 aa17.08■□□□□ 0.32
C9orf16-201ENST00000372994 DEFB103AP81534 67 aa17.08■□□□□ 0.32
C9orf16-201ENST00000372994 GRIK4Q16099 956 aa17.08■□□□□ 0.32
C9orf16-201ENST00000372994 MARCH8Q5T0T0 291 aa17.08■□□□□ 0.32
C9orf16-201ENST00000372994 TNPO1Q92973 898 aaKnown RBP17.08■□□□□ 0.32
C9orf16-201ENST00000372994 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
C9orf16-201ENST00000372994 RRN3P2A6NIE6 340 aa17.07■□□□□ 0.32
C9orf16-201ENST00000372994 IPO5O00410 1097 aaKnown RBP17.07■□□□□ 0.32
C9orf16-201ENST00000372994 CPLX1O14810 134 aa17.07■□□□□ 0.32
C9orf16-201ENST00000372994 CCNE2O96020 404 aa17.07■□□□□ 0.32
C9orf16-201ENST00000372994 SLC26A2P50443 739 aa17.07■□□□□ 0.32
C9orf16-201ENST00000372994 ADGRE1Q14246 886 aa17.07■□□□□ 0.32
C9orf16-201ENST00000372994 ABHD15Q6UXT9 468 aa17.07■□□□□ 0.32
C9orf16-201ENST00000372994 RUFY4Q6ZNE9 571 aa17.07■□□□□ 0.32
C9orf16-201ENST00000372994 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
C9orf16-201ENST00000372994 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
C9orf16-201ENST00000372994 RASGRP4Q8TDF6 673 aa17.07■□□□□ 0.32
C9orf16-201ENST00000372994 OSBPL7Q9BZF2 842 aa17.07■□□□□ 0.32
C9orf16-201ENST00000372994 TUBE1Q9UJT0 475 aa17.07■□□□□ 0.32
C9orf16-201ENST00000372994 MICAL3Q7RTP6 2002 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 RBAK-RBAKDNI3L0D1 243 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 EDIL3O43854 480 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 TLL1O43897 1013 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 GJB5O95377 273 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 DEXIO95424 95 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 CHRNA1P02708 482 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 CTSHP09668 335 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 INSRRP14616 1297 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 NLRP5P59047 1200 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 SETQ01105 290 aaPredicted RBP17.06■□□□□ 0.32
C9orf16-201ENST00000372994 TAP1Q03518 808 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 CPLX2Q6PUV4 134 aaKnown RBP17.06■□□□□ 0.32
C9orf16-201ENST00000372994 SEPT8Q92599 483 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 TBC1D22BQ9NU19 505 aa17.06■□□□□ 0.32
C9orf16-201ENST00000372994 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
C9orf16-201ENST00000372994 RPLP2P05387 115 aaKnown RBP17.05■□□□□ 0.32
C9orf16-201ENST00000372994 USP11P51784 963 aa17.05■□□□□ 0.32
C9orf16-201ENST00000372994 STK3Q13188 491 aa17.05■□□□□ 0.32
C9orf16-201ENST00000372994 PLCB4Q15147 1175 aa17.05■□□□□ 0.32
C9orf16-201ENST00000372994 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.05■□□□□ 0.32
C9orf16-201ENST00000372994 TMCO2Q7Z6W1 182 aaPredicted RBP17.05■□□□□ 0.32
C9orf16-201ENST00000372994 RSPH3Q86UC2 560 aa17.05■□□□□ 0.32
C9orf16-201ENST00000372994 LENG9Q96B70 501 aa17.05■□□□□ 0.32
C9orf16-201ENST00000372994 RAD9AQ99638 391 aa17.05■□□□□ 0.32
C9orf16-201ENST00000372994 ZNF577Q9BSK1 485 aa17.05■□□□□ 0.32
C9orf16-201ENST00000372994 ZBED2Q9BTP6 218 aa17.05■□□□□ 0.32
C9orf16-201ENST00000372994 M0R2N6 131 aa17.04■□□□□ 0.32
C9orf16-201ENST00000372994 ARHGEF15O94989 841 aa17.04■□□□□ 0.32
C9orf16-201ENST00000372994 MGAT3Q09327 533 aa17.04■□□□□ 0.32
C9orf16-201ENST00000372994 SCRN1Q12765 414 aa17.04■□□□□ 0.32
C9orf16-201ENST00000372994 PRR16Q569H4 304 aa17.04■□□□□ 0.32
C9orf16-201ENST00000372994 GALNT17Q6IS24 598 aa17.04■□□□□ 0.32
C9orf16-201ENST00000372994 ZNF746Q6NUN9 644 aaPredicted RBP17.04■□□□□ 0.32
C9orf16-201ENST00000372994 TPCN1Q9ULQ1 816 aa17.04■□□□□ 0.32
C9orf16-201ENST00000372994 PCDHA4Q9UN74 947 aa17.04■□□□□ 0.32
C9orf16-201ENST00000372994 TRPC6Q9Y210 931 aa17.04■□□□□ 0.32
C9orf16-201ENST00000372994 PCDHA2Q9Y5H9 948 aa17.04■□□□□ 0.32
C9orf16-201ENST00000372994 MYH9P35579 1960 aaKnown RBP17.04■□□□□ 0.32
C9orf16-201ENST00000372994 PRRC2BQ5JSZ5 2229 aaKnown RBP17.03■□□□□ 0.32
C9orf16-201ENST00000372994 POTEB3A0JP26 581 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 LCHNA4D1U4 455 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 DDX39AO00148 427 aaKnown RBP17.03■□□□□ 0.32
C9orf16-201ENST00000372994 PFKFB2O60825 505 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 CDKL5O76039 1030 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 AMHP03971 560 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 POU3F3P20264 500 aaPredicted RBP17.03■□□□□ 0.32
C9orf16-201ENST00000372994 IGFBP4P22692 258 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 IGBP1P78318 339 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 ANKRD1Q15327 319 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 NPY5RQ15761 445 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 FAM160B1Q5W0V3 765 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 MIS18BP1Q6P0N0 1132 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 POTEBQ6S5H4 581 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 CCDC60Q8IWA6 550 aaPredicted RBP17.03■□□□□ 0.32
C9orf16-201ENST00000372994 USP38Q8NB14 1042 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 DAGLBQ8NCG7 672 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 DNAJB3Q8WWF6 145 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 APBB2Q92870 758 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 AIFM3Q96NN9 605 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 IFIH1Q9BYX4 1025 aaKnown RBP17.03■□□□□ 0.32
C9orf16-201ENST00000372994 C22orf23Q9BZE7 217 aa17.03■□□□□ 0.32
C9orf16-201ENST00000372994 SLKQ9H2G2 1235 aaPredicted RBP17.03■□□□□ 0.32
C9orf16-201ENST00000372994 DLL1O00548 723 aa17.02■□□□□ 0.32
C9orf16-201ENST00000372994 BACH1O14867 736 aa17.02■□□□□ 0.32
C9orf16-201ENST00000372994 HBP1O60381 514 aa17.02■□□□□ 0.32
C9orf16-201ENST00000372994 HTRA4P83105 476 aaPredicted RBP17.02■□□□□ 0.32
C9orf16-201ENST00000372994 KRT76Q01546 638 aa17.02■□□□□ 0.32
C9orf16-201ENST00000372994 SWSAP1Q6NVH7 229 aa17.02■□□□□ 0.32
C9orf16-201ENST00000372994 SMAP1Q8IYB5 467 aaPredicted RBP17.02■□□□□ 0.32
C9orf16-201ENST00000372994 BLIDQ8IZY5 108 aa17.02■□□□□ 0.32
C9orf16-201ENST00000372994 TBCKQ8TEA7 893 aa17.02■□□□□ 0.32
C9orf16-201ENST00000372994 ATP8B4Q8TF62 1192 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms