RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ANKRD65E5RJM6 399 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 CPP00450 1065 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 ICAM1P05362 532 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 GNG11P61952 73 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 HERC4Q5GLZ8 1057 aaPredicted RBP14.15□□□□□ -0.14
GPC3-201ENST00000370818 WDR59Q6PJI9 974 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 EIF2AK1Q9BQI3 630 aaKnown RBP14.15□□□□□ -0.14
GPC3-201ENST00000370818 POLR3CQ9BUI4 534 aaPredicted RBP14.15□□□□□ -0.14
GPC3-201ENST00000370818 KIAA1683Q9H0B3 1180 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 AGPAT5Q9NUQ2 364 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 CNOT7Q9UIV1 285 aaKnown RBP14.15□□□□□ -0.14
GPC3-201ENST00000370818 HACL1Q9UJ83 578 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 CD2APQ9Y5K6 639 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 PPP2R3AQ06190 1150 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 GIT2Q14161 759 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 R3HDM1Q15032 1099 aaKnown RBP14.15□□□□□ -0.14
GPC3-201ENST00000370818 VWA3BQ502W6 1294 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 CEP55Q53EZ4 464 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 EP400NLQ6ZTU2 488 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 CCDC91Q7Z6B0 441 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 ACRBPQ8NEB7 543 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 SCFD1Q8WVM8 642 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 LPAR1Q92633 364 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 SLC5A5Q92911 643 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 HSD17B14Q9BPX1 270 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 CXorf56Q9H5V9 222 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 LZTFL1Q9NQ48 299 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 STK24Q9Y6E0 443 aa14.15□□□□□ -0.14
GPC3-201ENST00000370818 WDR46O15213 610 aaKnown RBP14.14□□□□□ -0.15
GPC3-201ENST00000370818 CTNND1O60716 968 aaKnown RBP14.14□□□□□ -0.15
GPC3-201ENST00000370818 HSD17B4P51659 736 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 BRD3Q15059 726 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 MMS22LQ6ZRQ5 1243 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 PRPF38AQ8NAV1 312 aaKnown RBP14.14□□□□□ -0.15
GPC3-201ENST00000370818 BANK1Q8NDB2 785 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 SLF1Q9BQI6 1058 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 REEP2Q9BRK0 252 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 KCTD10Q9H3F6 313 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 NDST4Q9H3R1 872 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 CCPG1Q9ULG6 757 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 MRFAP1Q9Y605 127 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 GJA3Q9Y6H8 435 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 FGFR1OPO95684 399 aaKnown RBP14.14□□□□□ -0.15
GPC3-201ENST00000370818 TRIM21P19474 475 aaKnown RBP14.14□□□□□ -0.15
GPC3-201ENST00000370818 PPP2R5CQ13362 524 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 NBPF12Q5TAG4 269 aaPredicted RBP14.14□□□□□ -0.15
GPC3-201ENST00000370818 LRRC31Q6UY01 552 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 RETREG2Q8NC44 543 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 TSG101Q99816 390 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 NUP58Q9BVL2 599 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 BHMT2Q9H2M3 363 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 COL20A1Q9P218 1284 aa14.14□□□□□ -0.15
GPC3-201ENST00000370818 NFIBO00712 420 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 KRT18P05783 430 aaKnown RBP14.13□□□□□ -0.15
GPC3-201ENST00000370818 ARP10275 920 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 ERCC3P19447 782 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 CASP5P51878 434 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 FKBP3Q00688 224 aaKnown RBP14.13□□□□□ -0.15
GPC3-201ENST00000370818 MAN2A1Q16706 1144 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 LRCH2Q5VUJ6 765 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 NELFCDQ8IXH7 590 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 CLEC4DQ8WXI8 215 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 CEP89Q96ST8 783 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 SIK3Q9Y2K2 1263 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 ATAD5Q96QE3 1844 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 N4BP1O75113 896 aaKnown RBP14.13□□□□□ -0.15
GPC3-201ENST00000370818 SLITRK3O94933 977 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 ABL1P00519 1130 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 MEA1Q16626 185 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 FIGNQ5HY92 759 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 BEND6Q5SZJ8 279 aaPredicted RBP14.13□□□□□ -0.15
GPC3-201ENST00000370818 FKBP15Q5T1M5 1219 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 HNRNPLLQ8WVV9 542 aaKnown RBP14.13□□□□□ -0.15
GPC3-201ENST00000370818 HOOK2Q96ED9 719 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 RUSC1Q9BVN2 902 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 EMILIN3Q9NT22 766 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 GINM1Q9NU53 330 aa14.13□□□□□ -0.15
GPC3-201ENST00000370818 REXO2Q9Y3B8 237 aaKnown RBP14.13□□□□□ -0.15
GPC3-201ENST00000370818 ZNF541Q9H0D2 1346 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 TRAF5O00463 557 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 CHMP2AO43633 222 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 MTMR2Q13614 643 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 CTTNQ14247 550 aaKnown RBP14.12□□□□□ -0.15
GPC3-201ENST00000370818 MSL3Q8N5Y2 521 aaKnown RBP14.12□□□□□ -0.15
GPC3-201ENST00000370818 ZHX3Q9H4I2 956 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 EHMT1Q9H9B1 1298 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 SLC38A10Q9HBR0 1119 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 FAN1Q9Y2M0 1017 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 EPN1Q9Y6I3 576 aaPredicted RBP14.12□□□□□ -0.15
GPC3-201ENST00000370818 RPTORQ8N122 1335 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 EPHB6O15197 1021 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 NDUFA10O95299 355 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 EYA4O95677 639 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 VCAM1P19320 739 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 ARHGAP25P42331 645 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 ZBED6P86452 979 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 B3GNT9Q6UX72 402 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 GOLGA1Q92805 767 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 BCAS3Q9H6U6 928 aa14.12□□□□□ -0.15
GPC3-201ENST00000370818 DONSONQ9NYP3 566 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms