RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 SMAD4Q13485 552 aaKnown RBP17.31■□□□□ 0.36
RPF1-202ENST00000370656 BTG3Q14201 252 aaPredicted RBP17.31■□□□□ 0.36
RPF1-202ENST00000370656 GRM4Q14833 912 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 CLUL1Q15846 466 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 HFE2Q6ZVN8 426 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 TRIM50Q86XT4 487 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 CLP1Q92989 425 aaKnown RBP17.31■□□□□ 0.36
RPF1-202ENST00000370656 SENP7Q9BQF6 1050 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 PLVAPQ9BX97 442 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 BCAS3Q9H6U6 928 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 RTEL1Q9NZ71 1219 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 SLC27A2O14975 620 aa17.3■□□□□ 0.36
RPF1-202ENST00000370656 GRM6O15303 877 aa17.3■□□□□ 0.36
RPF1-202ENST00000370656 GHRP10912 638 aa17.3■□□□□ 0.36
RPF1-202ENST00000370656 HERC4Q5GLZ8 1057 aaPredicted RBP17.3■□□□□ 0.36
RPF1-202ENST00000370656 XRRA1Q6P2D8 792 aa17.3■□□□□ 0.36
RPF1-202ENST00000370656 CUL5Q93034 780 aa17.3■□□□□ 0.36
RPF1-202ENST00000370656 IGFLR1Q9H665 355 aa17.3■□□□□ 0.36
RPF1-202ENST00000370656 CD207Q9UJ71 328 aa17.3■□□□□ 0.36
RPF1-202ENST00000370656 STXBP3O00186 592 aa17.29■□□□□ 0.36
RPF1-202ENST00000370656 CHRNA1P02708 482 aa17.29■□□□□ 0.36
RPF1-202ENST00000370656 MMP1P03956 469 aa17.29■□□□□ 0.36
RPF1-202ENST00000370656 RPLP2P05387 115 aaKnown RBP17.29■□□□□ 0.36
RPF1-202ENST00000370656 SP4Q02446 784 aa17.29■□□□□ 0.36
RPF1-202ENST00000370656 SART3Q15020 963 aaKnown RBP17.29■□□□□ 0.36
RPF1-202ENST00000370656 RNF20Q5VTR2 975 aa17.29■□□□□ 0.36
RPF1-202ENST00000370656 NLRX1Q86UT6 975 aa17.29■□□□□ 0.36
RPF1-202ENST00000370656 SMARCC2Q8TAQ2 1214 aa17.29■□□□□ 0.36
RPF1-202ENST00000370656 EHMT1Q9H9B1 1298 aa17.29■□□□□ 0.36
RPF1-202ENST00000370656 MUTYHQ9UIF7 546 aa17.29■□□□□ 0.36
RPF1-202ENST00000370656 ENPP3O14638 875 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 IFIT3O14879 490 aaKnown RBP17.28■□□□□ 0.36
RPF1-202ENST00000370656 NDUFV1P49821 464 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 DLX2Q07687 328 aaPredicted RBP17.28■□□□□ 0.36
RPF1-202ENST00000370656 PPFIA1Q13136 1202 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 SEMA3FQ13275 785 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 LPIN1Q14693 890 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 PKN1Q16512 942 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 NAALADL2Q58DX5 795 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 PCNX4Q63HM2 1172 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 CYB5R4Q7L1T6 521 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 RNF135Q8IUD6 432 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 P2RX5Q93086 422 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 CDHR1Q96JP9 859 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 RC3H2Q9HBD1 1191 aaKnown RBP17.28■□□□□ 0.36
RPF1-202ENST00000370656 ZSWIM6Q9HCJ5 1215 aa17.28■□□□□ 0.36
RPF1-202ENST00000370656 LINC00271P0C7V0 271 aa17.27■□□□□ 0.36
RPF1-202ENST00000370656 TCF7P36402 384 aaPredicted RBP17.27■□□□□ 0.36
RPF1-202ENST00000370656 MCM2P49736 904 aa17.27■□□□□ 0.36
RPF1-202ENST00000370656 WTAPQ15007 396 aa17.27■□□□□ 0.36
RPF1-202ENST00000370656 TSHZ1Q6ZSZ6 1077 aa17.27■□□□□ 0.36
RPF1-202ENST00000370656 EDAQ92838 391 aa17.27■□□□□ 0.36
RPF1-202ENST00000370656 ZNF689Q96CS4 500 aaPredicted RBP17.27■□□□□ 0.36
RPF1-202ENST00000370656 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.36
RPF1-202ENST00000370656 ERAP1Q9NZ08 941 aa17.27■□□□□ 0.36
RPF1-202ENST00000370656 TUBE1Q9UJT0 475 aa17.27■□□□□ 0.36
RPF1-202ENST00000370656 TECTAO75443 2155 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 KIAA1671Q9BY89 1806 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 LOXHD1Q8IVV2 1947 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 CYTH3O43739 400 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 ST18O60284 1047 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 TBX10O75333 385 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 DGKIO75912 1065 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 CSPG5O95196 566 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 CD2BP2O95400 341 aaKnown RBP17.26■□□□□ 0.35
RPF1-202ENST00000370656 MGAT3Q09327 533 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 ADAM15Q13444 863 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 KRT32Q14532 448 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 GRIK4Q16099 956 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 SLC35G1Q2M3R5 365 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 RUFY4Q6ZNE9 571 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 CATIPQ7Z7H3 387 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 RALYLQ86SE5 291 aaKnown RBP17.26■□□□□ 0.35
RPF1-202ENST00000370656 GLG1Q92896 1179 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 PRRX2Q99811 253 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 FTHL17Q9BXU8 183 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 PLAGL2Q9UPG8 496 aa17.26■□□□□ 0.35
RPF1-202ENST00000370656 CYP21A2P08686 494 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 STAG3L1P0CL83 205 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 PSMA5P28066 241 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 GTF2F1P35269 517 aaKnown RBP eCLIP17.25■□□□□ 0.35
RPF1-202ENST00000370656 NEK4P51957 841 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 TROAPQ12815 778 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 FBXO47Q5MNV8 452 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 IER5Q5VY09 327 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 BMP8AQ7Z5Y6 402 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 HSCBQ8IWL3 235 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 CMTR2Q8IYT2 770 aaKnown RBP17.25■□□□□ 0.35
RPF1-202ENST00000370656 DNAJB3Q8WWF6 145 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 PIBF1Q8WXW3 757 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 SEPT1Q8WYJ6 367 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 TNPO1Q92973 898 aaKnown RBP17.25■□□□□ 0.35
RPF1-202ENST00000370656 GPRASP2Q96D09 838 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 PHOX2BQ99453 314 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 SMARCAD1Q9H4L7 1026 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 SEC63Q9UGP8 760 aaKnown RBP17.25■□□□□ 0.35
RPF1-202ENST00000370656 CDY2AQ9Y6F7 541 aa17.25■□□□□ 0.35
RPF1-202ENST00000370656 MBLAC1A4D2B0 266 aaPredicted RBP17.24■□□□□ 0.35
RPF1-202ENST00000370656 K7ELQ4 463 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms