RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 USP17L13C9JLJ4 530 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 USP17L11C9JVI0 530 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 USP17L18D6R9N7 530 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 USP17L22D6RA61 530 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 USP17L17D6RBQ6 530 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 USP17L19D6RCP7 530 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 USP17L20D6RJB6 530 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 NEMP1O14524 444 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 IRX4P78413 519 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 USP17L24Q0WX57 530 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 SPP2Q13103 211 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 ACCSLQ4AC99 568 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 PPP6R3Q5H9R7 873 aaPredicted RBP9.23□□□□□ -0.93
ABCA4-201ENST00000370225 C10orf76Q5T2E6 689 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 USP17L6PQ6QN14 398 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 ANKARQ7Z5J8 1434 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 TRIML1Q8N9V2 468 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 WDR91A4D1P6 747 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 R3HDM1Q15032 1099 aaKnown RBP9.23□□□□□ -0.93
ABCA4-201ENST00000370225 AK8Q96MA6 479 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 TTC25Q96NG3 672 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 TTC1Q99614 292 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 ELP3Q9H9T3 547 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 HOXC10Q9NYD6 342 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 COL15A1P39059 1388 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 IGSF1Q8N6C5 1336 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 RPS6KA4O75676 772 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 GNAT1P11488 350 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 CACNB2Q08289 660 aaPredicted RBP9.23□□□□□ -0.93
ABCA4-201ENST00000370225 ZNF467Q7Z7K2 595 aaPredicted RBP9.23□□□□□ -0.93
ABCA4-201ENST00000370225 RAET1EQ8TD07 263 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 FGD4Q96M96 766 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 ATG3Q9NT62 314 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 NRBP1Q9UHY1 535 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 SSH2Q76I76 1423 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 USP17L10C9JJH3 530 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 TOM1L1O75674 476 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 KRT10P13645 584 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 GCFC2P16383 781 aaKnown RBP9.23□□□□□ -0.93
ABCA4-201ENST00000370225 MXI1P50539 228 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 COG7P83436 770 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 MUM1Q2TAK8 710 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 DPCR1Q3MIW9 517 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 ELMSAN1Q6PJG2 1045 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 FASTKD5Q7L8L6 764 aaKnown RBP9.23□□□□□ -0.93
ABCA4-201ENST00000370225 URGCPQ8TCY9 931 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 SPTLC3Q9NUV7 552 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 TMEM260Q9NX78 707 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 FAM8A1Q9UBU6 413 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 MINPP1Q9UNW1 487 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 SLCO1A2P46721 670 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 ZNF445P59923 1031 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 SPOPLQ6IQ16 392 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.23□□□□□ -0.93
ABCA4-201ENST00000370225 IFT122Q9HBG6 1241 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 NEDD4P46934 1319 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 SYNDIG1LA6NDD5 238 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 GNGT2O14610 69 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 KIF3CO14782 793 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 PPP6R2O75170 966 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 PSMA2P25787 234 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 PLTPP55058 493 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 ZNF568Q3ZCX4 644 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 CYFIP1Q7L576 1253 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 FOXP4Q8IVH2 680 aaPredicted RBP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 CELF1Q92879 486 aaKnown RBP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 SPATA33Q96N06 139 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 NPC1L1Q9UHC9 1359 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 EFCAB8A8MWE9 144 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 GSTA4O15217 222 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 RBM6P78332 1123 aaKnown RBP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 SLC39A14Q15043 492 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 ARL13BQ3SXY8 428 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 SLC35F6Q8N357 371 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 NGRNQ9NPE2 291 aaKnown RBP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 CDC42BPGQ6DT37 1551 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 POTEMA6NI47 508 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 DCAF4L1Q3SXM0 396 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 CFAP61Q8NHU2 1237 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 GPR108Q9NPR9 543 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 SAMSN1Q9NSI8 373 aaKnown RBP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 GJB4Q9NTQ9 266 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 CREB3O43889 395 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 OPHN1O60890 802 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 ZKSCAN8Q15776 578 aaPredicted RBP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 SWSAP1Q6NVH7 229 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 AP1M1Q9BXS5 423 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 MAGEF1Q9HAY2 307 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 ATP6V0A4Q9HBG4 840 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 HOMER3Q9NSC5 361 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 STK17AQ9UEE5 414 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 ATP8A1Q9Y2Q0 1164 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 RGS12O14924 1447 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 ADGRL2O95490 1459 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 SLC16A4O15374 487 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 CLNS1AP54105 237 aaKnown RBP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 CDR2Q01850 454 aa9.22□□□□□ -0.93
ABCA4-201ENST00000370225 C11orf57Q6ZUT1 292 aaPredicted RBP9.22□□□□□ -0.93
ABCA4-201ENST00000370225 N4BP2L2Q92802 583 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms