RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NOVA2Q9UNW9 492 aaKnown RBP19.58■□□□□ 0.72
SNX27-202ENST00000368841 CYP27A1Q02318 531 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 DCAF4L1Q3SXM0 396 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 SCN4BQ8IWT1 228 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 NUDCD1Q96RS6 583 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 GJB4Q9NTQ9 266 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 EPS15L1Q9UBC2 864 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 RAVER2Q9HCJ3 691 aaKnown RBP19.57■□□□□ 0.72
SNX27-202ENST00000368841 CACNB2Q08289 660 aaPredicted RBP19.57■□□□□ 0.72
SNX27-202ENST00000368841 PSAPP07602 524 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 CYP21A2P08686 494 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 RBM6P78332 1123 aaKnown RBP19.57■□□□□ 0.72
SNX27-202ENST00000368841 RNF207Q6ZRF8 634 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 LARGE1O95461 756 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 SYCP2LQ5T4T6 812 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 GSPT2Q8IYD1 628 aaKnown RBP19.57■□□□□ 0.72
SNX27-202ENST00000368841 TM6SF1Q9BZW5 370 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 CD2BP2O95400 341 aaKnown RBP19.57■□□□□ 0.72
SNX27-202ENST00000368841 ADD2P35612 726 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 USP14P54578 494 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 EMILIN3Q9NT22 766 aa19.57■□□□□ 0.72
SNX27-202ENST00000368841 SRGAP2O75044 1071 aa19.56■□□□□ 0.72
SNX27-202ENST00000368841 OCRLQ01968 901 aa19.56■□□□□ 0.72
SNX27-202ENST00000368841 TMED1Q13445 227 aa19.56■□□□□ 0.72
SNX27-202ENST00000368841 CAPRIN1Q14444 709 aaKnown RBP19.56■□□□□ 0.72
SNX27-202ENST00000368841 ZNF513Q8N8E2 541 aaPredicted RBP19.56■□□□□ 0.72
SNX27-202ENST00000368841 PPP1R36Q96LQ0 422 aa19.56■□□□□ 0.72
SNX27-202ENST00000368841 NACC1Q96RE7 527 aa19.56■□□□□ 0.72
SNX27-202ENST00000368841 SMYD3Q9H7B4 428 aa19.56■□□□□ 0.72
SNX27-202ENST00000368841 EXOC1LA0A1B0GW35 172 aa19.56■□□□□ 0.72
SNX27-202ENST00000368841 AFG1LQ8WV93 481 aa19.56■□□□□ 0.72
SNX27-202ENST00000368841 PER1O15534 1290 aaPredicted RBP19.56■□□□□ 0.72
SNX27-202ENST00000368841 CFAP43Q8NDM7 1665 aa19.56■□□□□ 0.72
SNX27-202ENST00000368841 ZMYM1Q5SVZ6 1142 aa19.56■□□□□ 0.72
SNX27-202ENST00000368841 FAM83BQ5T0W9 1011 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 KDELC2Q7Z4H8 507 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 NSUN7Q8NE18 718 aaKnown RBP19.55■□□□□ 0.72
SNX27-202ENST00000368841 MLXIPLQ9NP71 852 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 HEY1Q9Y5J3 304 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 ABCC12Q96J65 1359 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 MMP1P03956 469 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 NMT2O60551 498 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 BPIFB4P59827 614 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 ACBD5Q5T8D3 534 aaPredicted RBP19.55■□□□□ 0.72
SNX27-202ENST00000368841 PIH1D3Q9NQM4 214 aaKnown RBP19.55■□□□□ 0.72
SNX27-202ENST00000368841 ZSWIM5Q9P217 1185 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 ADD3Q9UEY8 706 aaKnown RBP19.55■□□□□ 0.72
SNX27-202ENST00000368841 KIAA0232Q92628 1395 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 GAP43P17677 238 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 ZBED1O96006 694 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 TRIML1Q8N9V2 468 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 NGRNQ9NPE2 291 aaKnown RBP19.55■□□□□ 0.72
SNX27-202ENST00000368841 SNX19Q92543 992 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 TTC17Q96AE7 1141 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 FOXP1Q9H334 677 aaPredicted RBP19.55■□□□□ 0.72
SNX27-202ENST00000368841 PARVGQ9HBI0 331 aa19.55■□□□□ 0.72
SNX27-202ENST00000368841 WDR64B1ANS9 1081 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 PAGE5Q96GU1 130 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 MYOM2P54296 1465 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 RGS12O14924 1447 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 NME3Q13232 169 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 SEMA3EO15041 775 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 CTNND1O60716 968 aaKnown RBP19.54■□□□□ 0.72
SNX27-202ENST00000368841 SLC10A4Q96EP9 437 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 DR1Q01658 176 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 MYL1P05976 194 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 MAN2A1Q16706 1144 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 RFX8Q6ZV50 586 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 ZNF507Q8TCN5 953 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 SLC13A4Q9UKG4 626 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 ATP8B3O60423 1300 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 PGRMC1O00264 195 aaKnown RBP19.54■□□□□ 0.72
SNX27-202ENST00000368841 NNTQ13423 1086 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 OSBP2Q969R2 916 aa19.54■□□□□ 0.72
SNX27-202ENST00000368841 TTC7AQ9ULT0 858 aaPredicted RBP19.54■□□□□ 0.72
SNX27-202ENST00000368841 TSPOAP1O95153 1857 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 TRIM49BA6NDI0 452 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 FOSP01100 380 aaPredicted RBP19.53■□□□□ 0.72
SNX27-202ENST00000368841 CDK8P49336 464 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 LMNB2Q03252 620 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 PPP6R2O75170 966 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 MCTP2Q6DN12 878 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 GAS2L3Q86XJ1 694 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 RNF135Q8IUD6 432 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 PFDN1O60925 122 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNX27-202ENST00000368841 KIAA0556O60303 1618 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 USP17L5A8MUK1 530 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 SH2B2O14492 632 aaPredicted RBP19.53■□□□□ 0.72
SNX27-202ENST00000368841 ETF1P62495 437 aaKnown RBP19.53■□□□□ 0.72
SNX27-202ENST00000368841 ACCSLQ4AC99 568 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 POLR3EQ9NVU0 708 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 C1orf228Q6PIY5 440 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 FBXO18Q8NFZ0 1043 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 TTC25Q96NG3 672 aa19.53■□□□□ 0.72
SNX27-202ENST00000368841 SASH1O94885 1247 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 RXRBP28702 533 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 SUPT20HL1Q3ZLR7 823 aa19.52■□□□□ 0.72
SNX27-202ENST00000368841 GPATCH4Q5T3I0 446 aaKnown RBP19.52■□□□□ 0.72
SNX27-202ENST00000368841 LTKP29376 864 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms