RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 PLAGL2Q9UPG8 496 aa9.74□□□□□ -0.85
THBS3-201ENST00000368378 CCDC88AQ3V6T2 1871 aa9.74□□□□□ -0.85
THBS3-201ENST00000368378 FRMD3A2A2Y4 597 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 TLR2O60603 784 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 GCNT3O95395 438 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 INPP5BP32019 993 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 CYP2J2P51589 502 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 KLHDC7AQ5VTJ3 777 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 AADACL2Q6P093 401 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 ADGRF4Q8IZF3 695 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 RETREG2Q8NC44 543 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 MYCBPQ99417 103 aaPredicted RBP9.73□□□□□ -0.85
THBS3-201ENST00000368378 TTYH3Q9C0H2 523 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 PSTPIP2Q9H939 334 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.73□□□□□ -0.85
THBS3-201ENST00000368378 MKRN1Q9UHC7 482 aaKnown RBP9.73□□□□□ -0.85
THBS3-201ENST00000368378 NARFQ9UHQ1 456 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 SCN7AQ01118 1682 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 RBAK-RBAKDNI3L0D1 243 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 PDHBP11177 359 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 NFIAQ12857 509 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 SLC10A5Q5PT55 438 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 ZNF746Q6NUN9 644 aaPredicted RBP9.73□□□□□ -0.85
THBS3-201ENST00000368378 ZNF804AQ7Z570 1209 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 DAAM2Q86T65 1068 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 CEP57Q86XR8 500 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 OTUD6BQ8N6M0 293 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 FAM84AQ96KN4 292 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 ZMYND12Q9H0C1 365 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 DBNDD1Q9H9R9 158 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 STK32BQ9NY57 414 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 PLAAQ9Y263 795 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 COL4A3BPQ9Y5P4 624 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 CASZ1Q86V15 1759 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 GOLGA6L10A6NI86 522 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 KRT13P13646 458 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 FLT3P36888 993 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 PTK2Q05397 1052 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 IFFO1Q0D2I5 559 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 KCNH2Q12809 1159 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 ZFPM1Q8IX07 1006 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 CCDC170Q8IYT3 715 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 MDM1Q8TC05 714 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 TRIM51Q9BSJ1 452 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 ADAM33Q9BZ11 813 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 CD209Q9NNX6 404 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 EMILIN3Q9NT22 766 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 PCDHA1Q9Y5I3 950 aa9.73□□□□□ -0.85
THBS3-201ENST00000368378 EIF4E1BA6NMX2 242 aaKnown RBP9.72□□□□□ -0.85
THBS3-201ENST00000368378 PLA2G4BP0C869 781 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 TM4SF1P30408 202 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 CTNNA1P35221 906 aaKnown RBP9.72□□□□□ -0.85
THBS3-201ENST00000368378 IFNAR2P48551 515 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 ACTN3Q08043 901 aaPredicted RBP9.72□□□□□ -0.85
THBS3-201ENST00000368378 CTTNQ14247 550 aaKnown RBP9.72□□□□□ -0.85
THBS3-201ENST00000368378 ASIC2Q16515 512 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 ZC2HC1CQ53FD0 456 aaPredicted RBP9.72□□□□□ -0.85
THBS3-201ENST00000368378 COL23A1Q86Y22 540 aaPredicted RBP9.72□□□□□ -0.85
THBS3-201ENST00000368378 TPH2Q8IWU9 490 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 MGARPQ8TDB4 240 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 CASKIN2Q8WXE0 1202 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 RAD54LQ92698 747 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 KAT2BQ92831 832 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 RAB34Q9BZG1 259 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 BHMT2Q9H2M3 363 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 LRRC4CQ9HCJ2 640 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 OSGEPQ9NPF4 335 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 SIK3Q9Y2K2 1263 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 ATP8A1Q9Y2Q0 1164 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 DLEC1Q9Y238 1755 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 DCDC2CA8MYV0 355 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 DAPK3O43293 454 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 TRIM49P0CI25 452 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 TRIM49CP0CI26 452 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 MYBP10242 640 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 MCM3P25205 808 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 GSTO1P78417 241 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 HDLBPQ00341 1268 aaKnown RBP9.72□□□□□ -0.85
THBS3-201ENST00000368378 FKBP3Q00688 224 aaKnown RBP9.72□□□□□ -0.85
THBS3-201ENST00000368378 RPS6KA1Q15418 735 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 MEA1Q16626 185 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 PDXDC1Q6P996 788 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 UNC13DQ70J99 1090 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 CCDC84Q86UT8 332 aaPredicted RBP9.72□□□□□ -0.85
THBS3-201ENST00000368378 SFR1Q86XK3 245 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 KIRREL3Q8IZU9 778 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 RNF217Q8TC41 542 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 SELENOSQ9BQE4 189 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 PCIF1Q9H4Z3 704 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 ACP6Q9NPH0 428 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 DDX4Q9NQI0 724 aaKnown RBP9.72□□□□□ -0.85
THBS3-201ENST00000368378 USP40Q9NVE5 1235 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 TMOD4Q9NZQ9 345 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 PTPN22Q9Y2R2 807 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 MYH1P12882 1939 aa9.72□□□□□ -0.85
THBS3-201ENST00000368378 LAD1O00515 517 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 KRIT1O00522 736 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 PPP1R11O60927 126 aaPredicted RBP9.71□□□□□ -0.85
THBS3-201ENST00000368378 LDHCP07864 332 aa9.71□□□□□ -0.85
THBS3-201ENST00000368378 TCP1P17987 556 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms