RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 TRERF1Q96PN7 1200 aa19.92■□□□□ 0.78
UBQLN4-201ENST00000368309 ACBD3Q9H3P7 528 aa19.92■□□□□ 0.78
UBQLN4-201ENST00000368309 A0A0U1RQG5 324 aaPredicted RBP19.92■□□□□ 0.78
UBQLN4-201ENST00000368309 OPLAHO14841 1288 aa19.92■□□□□ 0.78
UBQLN4-201ENST00000368309 BMP3P12645 472 aa19.92■□□□□ 0.78
UBQLN4-201ENST00000368309 TCP1P17987 556 aaKnown RBP19.92■□□□□ 0.78
UBQLN4-201ENST00000368309 KLHL30Q0D2K2 578 aa19.92■□□□□ 0.78
UBQLN4-201ENST00000368309 DNAAF5Q86Y56 855 aa19.92■□□□□ 0.78
UBQLN4-201ENST00000368309 PACSIN1Q9BY11 444 aa19.92■□□□□ 0.78
UBQLN4-201ENST00000368309 SYF2O95926 243 aaKnown RBP19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 PRLRP16471 622 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 KLRC1P26715 233 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 KCNA1Q09470 495 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 AOC3Q16853 763 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 SAMD1Q6SPF0 538 aaPredicted RBP19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 SYT2Q8N9I0 419 aaPredicted RBP19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 PLEKHA4Q9H4M7 779 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 HDAC9Q9UKV0 1011 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 PITPNM2Q9BZ72 1349 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 EML1O00423 815 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 FTCDO95954 541 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 CAPN2P17655 700 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 MARSP56192 900 aaKnown RBP19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 CCDC70Q6NSX1 233 aa19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 PRMT6Q96LA8 375 aaPredicted RBP19.91■□□□□ 0.78
UBQLN4-201ENST00000368309 PALMO75781 387 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 ZSCAN26Q16670 478 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 KNOP1Q1ED39 458 aaKnown RBP19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 Q4G0T1 1027 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 RBM26Q5T8P6 1007 aaKnown RBP19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 TAF3Q5VWG9 929 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 MOXD1Q6UVY6 613 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 MMGT1Q8N4V1 131 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 PIGOQ8TEQ8 1089 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 NUCKS1Q9H1E3 243 aaKnown RBP19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 PACSIN2Q9UNF0 486 aaPredicted RBP19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 C10orf71Q711Q0 1435 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 RNF40O75150 1001 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 SREBF1P36956 1147 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 ECE1P42892 770 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 KIAA0753Q2KHM9 967 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 DCAF17Q5H9S7 520 aaPredicted RBP19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 RUSC1Q9BVN2 902 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 IKZF4Q9H2S9 585 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 FAM204AQ9H8W3 233 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 ARMCX3Q9UH62 379 aaPredicted RBP19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 FAM184BQ9ULE4 1060 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 CHRNA5P30532 468 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 PAFAH1B1P43034 410 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 RNASE9P60153 205 aaKnown RBP19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 EDRF1Q3B7T1 1238 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 TCERG1LQ5VWI1 586 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 SYN2Q92777 582 aaPredicted RBP19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 MRIQ9BWK5 157 aa19.9■□□□□ 0.78
UBQLN4-201ENST00000368309 RBAK-RBAKDNI3L0D1 243 aa19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 CLIC2O15247 247 aa19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 POLD1P28340 1107 aa19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 GGCXP38435 758 aa19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 GMCL1Q96IK5 515 aa19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 CSRNP1Q96S65 589 aa19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 VIPAS39Q9H9C1 493 aa19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 MED4Q9NPJ6 270 aa19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 RBM12Q9NTZ6 932 aaKnown RBP19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 PSD3Q9NYI0 1048 aa19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 ARFGEF1Q9Y6D6 1849 aa19.89■□□□□ 0.78
UBQLN4-201ENST00000368309 UBXN2AP68543 259 aa19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 CTTNQ14247 550 aaKnown RBP19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 SLC18A3Q16572 532 aa19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 GMCL1P1Q8NEA9 526 aa19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 GANQ9H2C0 597 aa19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 ZBTB39O15060 712 aa19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 CHMP2AO43633 222 aa19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 AKAP3O75969 853 aa19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 CASP4P49662 377 aa19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 RNF10Q8N5U6 811 aaKnown RBP19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 AKT1S1Q96B36 256 aa19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 EIF2AK1Q9BQI3 630 aaKnown RBP19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 PRR12Q9ULL5 1215 aa19.89■□□□□ 0.77
UBQLN4-201ENST00000368309 TBX3O15119 743 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 GCNT3O95395 438 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 APBA3O96018 575 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 CFBP00751 764 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 FOSP01100 380 aaPredicted RBP19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 ASIC2Q16515 512 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 SND1Q7KZF4 910 aaKnown RBP eCLIP19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 FAM20AQ96MK3 541 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 ZC3H4Q9UPT8 1303 aaKnown RBP19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 SERPINA10Q9UK55 444 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 VAV3Q9UKW4 847 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 PPP4R3CPQ6ZMV5 832 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 SPAG5Q96R06 1193 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 AIPL1Q9NZN9 384 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 TRAF3IP3Q9Y228 551 aa19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 GREB1LQ9C091 1923 aaPredicted RBP19.88■□□□□ 0.77
UBQLN4-201ENST00000368309 QSER1Q2KHR3 1735 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 H0YIN7 160 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 HDLBPQ00341 1268 aaKnown RBP19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 PTK2Q05397 1052 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 NAB2Q15742 525 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms