RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 DCAF15Q66K64 600 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 BATF3Q9NR55 127 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 USP40Q9NVE5 1235 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 DNAJC17Q9NVM6 304 aaKnown RBP17.98■□□□□ 0.47
NID1-202ENST00000366595 ANO9A1A5B4 782 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 TEX9Q8N6V9 391 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 SNX19Q92543 992 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 PNMA6EA0A0J9YXQ4 647 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 GPATCH4Q5T3I0 446 aaKnown RBP17.97■□□□□ 0.47
NID1-202ENST00000366595 RGS9BPQ6ZS82 235 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 ARHGEF25Q86VW2 580 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 RYBPQ8N488 228 aaPredicted RBP17.97■□□□□ 0.47
NID1-202ENST00000366595 SLC7A3Q8WY07 619 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 RBM41Q96IZ5 413 aaKnown RBP17.97■□□□□ 0.47
NID1-202ENST00000366595 UIMC1Q96RL1 719 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 LRRC4Q9HBW1 653 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 KIF17Q9P2E2 1029 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 GOLGA8SH3BPF8 625 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 SEMA3EO15041 775 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 SRGAP2CP0DJJ0 459 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 ADD1P35611 737 aaKnown RBP17.97■□□□□ 0.47
NID1-202ENST00000366595 IRX1P78414 480 aaPredicted RBP17.97■□□□□ 0.47
NID1-202ENST00000366595 SKOR1P84550 965 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
NID1-202ENST00000366595 DENND4BO75064 1496 aaPredicted RBP17.97■□□□□ 0.47
NID1-202ENST00000366595 KIAA0232Q92628 1395 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 TOP2BQ02880 1626 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 PDIA3P30101 505 aaKnown RBP17.97■□□□□ 0.47
NID1-202ENST00000366595 EPHB1P54762 984 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 ADAM21Q9UKJ8 722 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 GMNCA6NCL1 334 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 H0Y3Z8 333 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 CCDC22O60826 627 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
NID1-202ENST00000366595 ARMCX2Q7L311 632 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 FAM133AQ8N9E0 248 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 HIPK4Q8NE63 616 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 CDC26Q8NHZ8 85 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 TTC17Q96AE7 1141 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 CCDC90BQ9GZT6 254 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 GCNT4Q9P109 453 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 PCDHA4Q9UN74 947 aa17.97■□□□□ 0.47
NID1-202ENST00000366595 LRRC63Q05C16 580 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 AMNQ9BXJ7 453 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 DIABLOQ9NR28 239 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 NRBP1Q9UHY1 535 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 ZNF189O75820 626 aaPredicted RBP17.96■□□□□ 0.47
NID1-202ENST00000366595 ASPRV1Q53RT3 343 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 ANGPTL8Q6UXH0 198 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 NOP9Q86U38 636 aaKnown RBP17.96■□□□□ 0.47
NID1-202ENST00000366595 PARP9Q8IXQ6 854 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 ZNF229Q9UJW7 825 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 CSADQ9Y600 493 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 NPC1L1Q9UHC9 1359 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 DDX5P17844 614 aaKnown RBP17.96■□□□□ 0.47
NID1-202ENST00000366595 DYNLT1P63172 113 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 TFDP2Q14188 446 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 PTK2BQ14289 1009 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 CAPRIN1Q14444 709 aaKnown RBP17.96■□□□□ 0.47
NID1-202ENST00000366595 EFTUD2Q15029 972 aaKnown RBP eCLIP17.96■□□□□ 0.475e-6■■■■■ 31.4
NID1-202ENST00000366595 ACRBPQ8NEB7 543 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 NFU1Q9UMS0 254 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 ABCC1P33527 1531 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 WDR17Q8IZU2 1322 aa17.96■□□□□ 0.47
NID1-202ENST00000366595 RASA4BC9J798 803 aa17.96■□□□□ 0.46
NID1-202ENST00000366595 RASA4O43374 803 aa17.96■□□□□ 0.46
NID1-202ENST00000366595 TAF5LO75529 589 aa17.96■□□□□ 0.46
NID1-202ENST00000366595 ECM2O94769 699 aaPredicted RBP17.96■□□□□ 0.46
NID1-202ENST00000366595 ANP32DO95626 131 aa17.96■□□□□ 0.46
NID1-202ENST00000366595 OSBPL1AQ9BXW6 950 aa17.96■□□□□ 0.46
NID1-202ENST00000366595 ESRRBO95718 433 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 PMS1P54277 932 aaKnown RBP17.95■□□□□ 0.46
NID1-202ENST00000366595 COPS2P61201 443 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 MYO1EQ12965 1108 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 NBPF20Q3BBV1 942 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 FAM47CQ5HY64 1035 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 EPM2AIP1Q7L775 607 aaPredicted RBP17.95■□□□□ 0.46
NID1-202ENST00000366595 SLC24A3Q9HC58 644 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 STMN3Q9NZ72 180 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 PRAG1Q86YV5 1406 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 GFPT2O94808 682 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 ALDH1B1P30837 517 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 FBXO38Q6PIJ6 1188 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 OTUB1Q96FW1 271 aaPredicted RBP17.95■□□□□ 0.46
NID1-202ENST00000366595 KIF9Q9HAQ2 790 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 USP19O94966 1318 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 H0YIN7 160 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 FMNL1O95466 1100 aaPredicted RBP17.95■□□□□ 0.46
NID1-202ENST00000366595 MXI1P50539 228 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 SSH3Q8TE77 659 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 KMT5AQ9NQR1 393 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 ATP11BQ9Y2G3 1177 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 FAM95CA0A1B0GW59 222 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 PSMC1P62191 440 aaKnown RBP17.95■□□□□ 0.46
NID1-202ENST00000366595 PDCLQ13371 301 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 DPCR1Q3MIW9 517 aa17.95■□□□□ 0.46
NID1-202ENST00000366595 DDX42Q86XP3 938 aaKnown RBP eCLIP17.95■□□□□ 0.46
NID1-202ENST00000366595 SIX6OS1Q8N1H7 587 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms