RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 GNL2Q13823 731 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 CAVIN1Q6NZI2 390 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 CNKSR3Q6P9H4 555 aa12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 DIS3L2Q8IYB7 885 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 COPS5Q92905 334 aa12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 PRRX2Q99811 253 aa12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 CYP39A1Q9NYL5 469 aa12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 SYNPO2Q9UMS6 1093 aa12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 KCNJ14Q9UNX9 436 aa12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 NOD1Q9Y239 953 aa12.78□□□□□ -0.36
CSNK1E-202ENST00000366216 BAZ2BQ9UIF8 2168 aaKnown RBP12.77□□□□□ -0.36
CSNK1E-202ENST00000366216 TMEM232C9JQI7 657 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 CYTH3O43739 400 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 FDX1P10109 184 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 ZNF445P59923 1031 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 PTPROQ16827 1216 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 TKFCQ3LXA3 575 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 TIGD5Q53EQ6 642 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 HERC4Q5GLZ8 1057 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 IER5LQ5T953 404 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 SLFN13Q68D06 897 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 NOSTRINQ8IVI9 506 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 LINC00301Q8NCQ3 95 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 KCNG4Q8TDN1 519 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 AFAP1L1Q8TED9 768 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 PABPC5Q96DU9 382 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 PGBD1Q96JS3 809 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 TRERF1Q96PN7 1200 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 C17orf80Q9BSJ5 609 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 WDR11Q9BZH6 1224 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 BRMS1Q9HCU9 246 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 VPS54Q9P1Q0 977 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 TMEM63CQ9P1W3 806 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 MUTYHQ9UIF7 546 aa12.77□□□□□ -0.37
CSNK1E-202ENST00000366216 MYO10Q9HD67 2058 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 ABHD14A-ACY1A0A1B0GW23 586 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 RBM47A0AV96 593 aaKnown RBP12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 GOLGA6L4A6NEF3 574 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 BTBD18B2RXH4 712 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 GFRA3O60609 400 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 BMP3P12645 472 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 ALAS1P13196 640 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 CALML3P27482 149 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 KRT2P35908 639 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 COL19A1Q14993 1142 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 SLC35G1Q2M3R5 365 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 BRDTQ58F21 947 aaPredicted RBP12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 GPATCH4Q5T3I0 446 aaKnown RBP12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 GALNT17Q6IS24 598 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 EP400NLQ6ZTU2 488 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 BANK1Q8NDB2 785 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 GMCL1P1Q8NEA9 526 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 OR6J1Q8NGC5 347 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 CAGE1Q8TC20 777 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 DCAF4Q8WV16 495 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 RIOX1Q9H6W3 641 aa12.76□□□□□ -0.37
CSNK1E-202ENST00000366216 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 hCG_1984214I3L0E3 225 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 KPNA6O60684 536 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 NBNO60934 754 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 EFCAB14O75071 495 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 PARNO95453 639 aaKnown RBP12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 DMDP11532 3685 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 SELPP16109 830 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 STAT2P52630 851 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 CACNA1BQ00975 2339 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 CEBPZQ03701 1054 aaKnown RBP12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 ZNF543Q08ER8 600 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 TCF15Q12870 199 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 STK38Q15208 465 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 NPY5RQ15761 445 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 PTGISQ16647 500 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 RILPL1Q5EBL4 403 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 TCEAL5Q5H9L2 206 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 CCDC183Q5T5S1 534 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 FAM117BQ6P1L5 589 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 LRRC8DQ7L1W4 858 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 BMP8AQ7Z5Y6 402 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 ZNF713Q8N859 430 aaPredicted RBP12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 CCDC148Q8NFR7 591 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 RRP36Q96EU6 259 aaKnown RBP12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 POP1Q99575 1024 aaKnown RBP12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 BARHL2Q9NY43 387 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 INSL6Q9Y581 213 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 CLIC4Q9Y696 253 aa12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 MORC2Q9Y6X9 1032 aaPredicted RBP12.75□□□□□ -0.37
CSNK1E-202ENST00000366216 ZNF292O60281 2723 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 A0A1W2PQ27 194 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 A0A1W2PQ64 194 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 A0A1W2PQD8 194 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 FSD2A1L4K1 749 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 SPTLC2O15270 562 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 PPP6R2O75170 966 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 LETM1O95202 739 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 CXCL10P02778 98 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 GOLGA8HP0CJ92 632 aa12.74□□□□□ -0.37
CSNK1E-202ENST00000366216 NLRP5P59047 1200 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms