RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SRSF7Q16629 238 aaKnown RBP eCLIP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 CWF19L2Q2TBE0 894 aaKnown RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 DGKKQ5KSL6 1271 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 SPTY2D1Q68D10 685 aaPredicted RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 DPP8Q6V1X1 898 aaPredicted RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 REC114Q7Z4M0 266 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 CPNE8Q86YQ8 564 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZDHHC17Q8IUH5 632 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZSCAN29Q8IWY8 852 aaPredicted RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 TRIM48Q8IWZ4 208 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 STPG3Q8N7X2 389 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 HIRIP3Q9BW71 556 aaPredicted RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 NOL6Q9H6R4 1146 aaKnown RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 GP6Q9HCN6 339 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 BTG4Q9NY30 223 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 SUCOQ9UBS9 1254 aaKnown RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 TRPS1Q9UHF7 1281 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 FBXO10Q9UK96 956 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 TBC1D30Q9Y2I9 924 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 DIS3Q9Y2L1 958 aaKnown RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 POLR3KQ9Y2Y1 108 aaPredicted RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 A0A087WZG4 1122 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 A0A1W2PRX2 142 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 TCRBV5S2A0A599 114 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 FAM221AA4D161 298 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 C2orf71A6NGG8 1288 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 SHOXO15266 292 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 MYO1BO43795 1136 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 F13A1P00488 732 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 TNFRSF1BP20333 461 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 EIF4BP23588 611 aaKnown RBP0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZEB1P37275 1124 aaPredicted RBP0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 GLRBP48167 497 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 PTH2RP49190 550 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 GTF2A2P52657 109 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZNF445P59923 1031 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 RPL11P62913 178 aaKnown RBP0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 TUBA4AP68366 448 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 LMNB2Q03252 620 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 OCA2Q04671 838 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 TCEAL1Q15170 157 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 SKIDA1Q1XH10 827 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 LRRFIP1Q32MZ4 808 aaKnown RBP0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 EMC4Q5J8M3 183 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 LCE3AQ5TA76 89 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 STEAP3Q658P3 488 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 CYP4F22Q6NT55 531 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 BNC2Q6ZN30 1099 aaPredicted RBP0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 LRP10Q7Z4F1 713 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 TECPR1Q7Z6L1 1165 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 TEX2Q8IWB9 1127 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 TMEM192Q8IY95 271 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 GPR135Q8IZ08 494 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 SAMD14Q8IZD0 417 aaPredicted RBP0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 KRT78Q8N1N4 520 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 ARRDC4Q8NCT1 418 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 TTLL11Q8NHH1 800 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 CFHR4Q92496 578 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 BRF1Q92994 677 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 TRMT2BQ96GJ1 504 aaKnown RBP0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 OR10A2Q9H208 303 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 SERHL2Q9H4I8 314 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 MYOTQ9UBF9 498 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 X6R8D5 127 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZNF804BA4D1E1 1349 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZNF521Q96K83 1311 aa0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 COL11A2P13942 1736 aaPredicted RBP0.81□□□□□ -2.28
RNU6-54P-201ENST00000365563 ESYT3A0FGR9 886 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 CGB1A6NKQ9 187 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 KRTAP4-16G5E9R7 235 aaPredicted RBP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 TNFRSF10CO14798 259 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 TRIM24O15164 1050 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 IPO13O94829 963 aaKnown RBP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 GAS8-AS1O95177 125 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 ATE1O95260 518 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 MATN4O95460 622 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 ENO2P09104 434 aaPredicted RBP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 PDE6AP16499 860 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 CD247P20963 164 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 NR4A1P22736 598 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 PLCD1P51178 756 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 SEC24CP53992 1094 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 PMS1P54277 932 aaKnown RBP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 AMPD2Q01433 879 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 MPP3Q13368 585 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 CAMK2GQ13555 558 aaPredicted RBP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 RIN1Q13671 783 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 PPP2R5DQ14738 602 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 NOLC1Q14978 699 aaKnown RBP eCLIP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 ELAVL1Q15717 326 aaKnown RBP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 DDB1Q16531 1140 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 ANKRD39Q53RE8 183 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 SNAP47Q5SQN1 464 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 PHF19Q5T6S3 580 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 CCDC62Q6P9F0 684 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 HTR3DQ70Z44 454 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 TMC7Q7Z402 723 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 ARHGEF25Q86VW2 580 aa0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 CMTR2Q8IYT2 770 aaKnown RBP0.8□□□□□ -2.28
RNU6-54P-201ENST00000365563 RTKN2Q8IZC4 609 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms