RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 SP110Q9HB58 689 aa4.55□□□□□ -1.68
RNU6-1249P-201ENST00000363237 ARFGAP3Q9NP61 516 aa4.55□□□□□ -1.68
RNU6-1249P-201ENST00000363237 JADE2Q9NQC1 790 aa4.55□□□□□ -1.68
RNU6-1249P-201ENST00000363237 PRDM5Q9NQX1 630 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1249P-201ENST00000363237 PPARGC1AQ9UBK2 798 aaKnown RBP4.55□□□□□ -1.68
RNU6-1249P-201ENST00000363237 LRCH1Q9Y2L9 728 aa4.55□□□□□ -1.68
RNU6-1249P-201ENST00000363237 RPS6KL1Q9Y6S9 549 aa4.55□□□□□ -1.68
RNU6-1249P-201ENST00000363237 SHISA3A0PJX4 238 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 C11orf95C9JLR9 678 aaPredicted RBP4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 GOLIM4O00461 696 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 FGF10O15520 208 aaPredicted RBP4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 NDUFS2O75306 463 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 CBX7O95931 251 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 AMY2AP04746 511 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 NFICP08651 508 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 GNAT1P11488 350 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 SRFP11831 508 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 KRT15P19012 456 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 AMY2BP19961 511 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 C5AR1P21730 350 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 PCBP3P57721 371 aaKnown RBP4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 RTP2Q5QGT7 225 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 CDPF1Q6NVV7 123 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 SEZ6L2Q6UXD5 910 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 ARHGAP36Q6ZRI8 547 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 DPP9Q86TI2 863 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 PTRH1Q86Y79 214 aaKnown RBP4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 NOSTRINQ8IVI9 506 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 KIAA0319LQ8IZA0 1049 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 NLGN4XQ8N0W4 816 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 KRT78Q8N1N4 520 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 LINC00116Q8NCU8 138 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 CCT6BQ92526 530 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 TRIM63Q969Q1 353 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 COL25A1Q9BXS0 654 aaPredicted RBP4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 TRIT1Q9H3H1 467 aaKnown RBP4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 RSAD1Q9HA92 442 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 LGR6Q9HBX8 967 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 CLDND1Q9NY35 253 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 FNIP2Q9P278 1114 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 L1RE1Q9UN81 338 aa4.54□□□□□ -1.68
RNU6-1249P-201ENST00000363237 CNTNAP4Q9C0A0 1308 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 SSU72P8A0A1W2PR75 194 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 RASA4BC9J798 803 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 F8W735 103 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 RASA4O43374 803 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 NPHS1O60500 1241 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 CLASP2O75122 1294 aaKnown RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 UBXN7O94888 489 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 ZNF865P0CJ78 1059 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 MYBP10242 640 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 HSD3B1P14060 373 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 BCL6P41182 706 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 PREPP48147 710 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 SLC5A3P53794 718 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 SLC16A1P53985 500 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 MRPS9P82933 396 aaKnown RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 SRSF2Q01130 221 aaKnown RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 KIF23Q02241 960 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 TNK2Q07912 1038 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 PUM3Q15397 648 aaKnown RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 IFI16Q16666 785 aaKnown RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 UGT8Q16880 541 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 PGS1Q32NB8 556 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 TOR2AQ5JU69 321 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 HABP4Q5JVS0 413 aaKnown RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 DGKKQ5KSL6 1271 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 L1TD1Q5T7N2 865 aaKnown RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 RNF220Q5VTB9 566 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 CYP2R1Q6VVX0 501 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 NME9Q86XW9 330 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 CPNE8Q86YQ8 564 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 PPHLN1Q8NEY8 458 aaKnown RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 FBLIM1Q8WUP2 373 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 DLG3Q92796 817 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 COA7Q96BR5 231 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 RAX2Q96IS3 184 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 MPP4Q96JB8 637 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 TBATAQ96M53 351 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 PTCHD1Q96NR3 888 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 TBCBQ99426 244 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 DUSP23Q9BVJ7 150 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 JAM3Q9BX67 310 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 WDR12Q9GZL7 423 aaKnown RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 MS4A5Q9H3V2 200 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 NXF1Q9UBU9 619 aaKnown RBP4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 MSRAQ9UJ68 235 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 POLHQ9Y253 713 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 PCDHGB6Q9Y5F9 930 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 B3GALT1Q9Y5Z6 326 aa4.53□□□□□ -1.68
RNU6-1249P-201ENST00000363237 C7orf72A4D263 438 aa4.52□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CAPN8A6NHC0 703 aa4.52□□□□□ -1.69
RNU6-1249P-201ENST00000363237 WTIPA6NIX2 430 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1249P-201ENST00000363237 IGF2BP3O00425 579 aaKnown RBP eCLIP4.52□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SCDO00767 359 aa4.52□□□□□ -1.69
RNU6-1249P-201ENST00000363237 B3GALT2O43825 422 aa4.52□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MGEA5O60502 916 aa4.52□□□□□ -1.69
RNU6-1249P-201ENST00000363237 TLR5O60602 858 aa4.52□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ADAMTS2O95450 1211 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms