RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 E2F4Q16254 413 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 LY6KQ17RY6 165 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 CCDC62Q6P9F0 684 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 KRBA2Q6ZNG9 492 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 NECAB2Q7Z6G3 386 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 TRMT44Q8IYL2 757 aaKnown RBP23.12■■□□□ 1.29
SHISA4-201ENST00000362011 CEP57L1Q8IYX8 460 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 CNNM3Q8NE01 707 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 DIS3LQ8TF46 1054 aaKnown RBP23.12■■□□□ 1.29
SHISA4-201ENST00000362011 PNMA5Q96PV4 448 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 POLR3CQ9BUI4 534 aaPredicted RBP23.12■■□□□ 1.29
SHISA4-201ENST00000362011 TUFT1Q9NNX1 390 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 PDGFCQ9NRA1 345 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 ZHX1Q9UKY1 873 aaPredicted RBP23.12■■□□□ 1.29
SHISA4-201ENST00000362011 SAMM50Q9Y512 469 aa23.12■■□□□ 1.29
SHISA4-201ENST00000362011 WDR64B1ANS9 1081 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 ACTN4O43707 911 aaKnown RBP23.11■■□□□ 1.29
SHISA4-201ENST00000362011 MED24O75448 989 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 GGPS1O95749 300 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 TXNP10599 105 aaKnown RBP23.11■■□□□ 1.29
SHISA4-201ENST00000362011 BMP8BP34820 402 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 LONRF3Q496Y0 759 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 TMEM119Q4V9L6 283 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 CYFIP1Q7L576 1253 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 SMAP1Q8IYB5 467 aaPredicted RBP23.11■■□□□ 1.29
SHISA4-201ENST00000362011 CCDC34Q96HJ3 373 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 PLIN2Q99541 437 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 GDF15Q99988 308 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 CUEDC2Q9H467 287 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 STK17AQ9UEE5 414 aa23.11■■□□□ 1.29
SHISA4-201ENST00000362011 POTEB3A0JP26 581 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 CTAGE5O15320 804 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 CCNE2O96020 404 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 IGHA2P01877 340 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 MUTP22033 750 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 KANK3Q6NY19 840 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 POTEBQ6S5H4 581 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 DYDC2Q96IM9 177 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 TNMDQ9H2S6 317 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 BCAS3Q9H6U6 928 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 MLXIPQ9HAP2 919 aa23.1■■□□□ 1.29
SHISA4-201ENST00000362011 SORBS3O60504 671 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 SLFN14P0C7P3 912 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 CYP2C19P33261 490 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 ADCYAP1R1P41586 468 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 ACTR2P61160 394 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 CYP4A11Q02928 519 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 CELF3Q5SZQ8 465 aaKnown RBP23.09■■□□□ 1.29
SHISA4-201ENST00000362011 MAP3K21Q5TCX8 1036 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 MFSD14CQ5VZR4 134 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 IQSEC1Q6DN90 963 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 METTL7BQ6UX53 244 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 CATSPER3Q86XQ3 398 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 DHX37Q8IY37 1157 aaKnown RBP23.09■■□□□ 1.29
SHISA4-201ENST00000362011 MAGEF1Q9HAY2 307 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 HOOK1Q9UJC3 728 aaKnown RBP23.09■■□□□ 1.29
SHISA4-201ENST00000362011 FRMPD3Q5JV73 1810 aa23.09■■□□□ 1.29
SHISA4-201ENST00000362011 P4HBP07237 508 aaKnown RBP23.08■■□□□ 1.29
SHISA4-201ENST00000362011 SPATA31C1P0DKV0 1188 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 SP4Q02446 784 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 TRIM32Q13049 653 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 CAMK4Q16566 473 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 ECM1Q16610 540 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 NAALADL2Q58DX5 795 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 PDXDC2PQ6P474 469 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 ELOA2Q8IYF1 753 aaPredicted RBP23.08■■□□□ 1.29
SHISA4-201ENST00000362011 KCTD17Q8N5Z5 321 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 TRIB2Q92519 343 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 HSD17B14Q9BPX1 270 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 HMX1Q9NP08 348 aaPredicted RBP23.08■■□□□ 1.29
SHISA4-201ENST00000362011 RGL1Q9NZL6 768 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 OGDHLQ9ULD0 1010 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 KIAA1024Q9UPX6 916 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 PCDHA10Q9Y5I2 948 aa23.08■■□□□ 1.29
SHISA4-201ENST00000362011 KAT6AQ92794 2004 aa23.08■■□□□ 1.28
SHISA4-201ENST00000362011 NKRFO15226 690 aaKnown RBP eCLIP23.08■■□□□ 1.28
SHISA4-201ENST00000362011 GH1P01241 217 aa23.08■■□□□ 1.28
SHISA4-201ENST00000362011 PSAPP07602 524 aa23.08■■□□□ 1.28
SHISA4-201ENST00000362011 CTTNQ14247 550 aaKnown RBP23.08■■□□□ 1.28
SHISA4-201ENST00000362011 CCDC144BQ3MJ40 725 aa23.08■■□□□ 1.28
SHISA4-201ENST00000362011 PRAMEF19Q5SWL8 479 aa23.08■■□□□ 1.28
SHISA4-201ENST00000362011 MIS18BP1Q6P0N0 1132 aa23.08■■□□□ 1.28
SHISA4-201ENST00000362011 POTEGQ6S5H5 508 aa23.08■■□□□ 1.28
SHISA4-201ENST00000362011 COPS5Q92905 334 aa23.08■■□□□ 1.28
SHISA4-201ENST00000362011 ANP32EQ9BTT0 268 aa23.08■■□□□ 1.28
SHISA4-201ENST00000362011 NRBP1Q9UHY1 535 aa23.08■■□□□ 1.28
SHISA4-201ENST00000362011 SLITRK3O94933 977 aa23.07■■□□□ 1.28
SHISA4-201ENST00000362011 LETM1O95202 739 aaPredicted RBP23.07■■□□□ 1.28
SHISA4-201ENST00000362011 SUPT20HL2P0C7V6 817 aa23.07■■□□□ 1.28
SHISA4-201ENST00000362011 ZNF865P0CJ78 1059 aaPredicted RBP23.07■■□□□ 1.28
SHISA4-201ENST00000362011 GPR153Q6NV75 609 aa23.07■■□□□ 1.28
SHISA4-201ENST00000362011 TPH2Q8IWU9 490 aa23.07■■□□□ 1.28
SHISA4-201ENST00000362011 BANK1Q8NDB2 785 aa23.07■■□□□ 1.28
SHISA4-201ENST00000362011 LRRC15Q8TF66 581 aa23.07■■□□□ 1.28
SHISA4-201ENST00000362011 RAD54LQ92698 747 aa23.07■■□□□ 1.28
SHISA4-201ENST00000362011 LRCH3Q96II8 777 aa23.07■■□□□ 1.28
SHISA4-201ENST00000362011 LXNQ9BS40 222 aa23.07■■□□□ 1.28
SHISA4-201ENST00000362011 GZF1Q9H116 711 aaPredicted RBP23.07■■□□□ 1.28
SHISA4-201ENST00000362011 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.06■■□□□ 1.28
SHISA4-201ENST00000362011 DKC1O60832 514 aaKnown RBP eCLIP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms