RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 GSTA4O15217 222 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 SFNP31947 248 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 KYAT1Q16773 422 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 CCDC38Q502W7 563 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 TOGARAM2Q6ZUX3 1019 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 ERICH1Q86X53 443 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 TTC30BQ8N4P2 665 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 ALKBH8Q96BT7 664 aaKnown RBP11.81□□□□□ -0.52
CLIP1-203ENST00000361654 SPZ1Q9BXG8 430 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 JRKLQ9Y4A0 524 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 OVOS2A0A0G2JMS6 1433 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 OVOS2A0A0J9YW53 1432 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 OVOS2Q6IE36 1432 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 FAM170AA1A519 330 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 GNGT2O14610 69 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 SUSD4Q5VX71 490 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 FBXO18Q8NFZ0 1043 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 TUBGCP2Q9BSJ2 902 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 MAGEB5Q9BZ81 275 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
CLIP1-203ENST00000361654 EN1Q05925 392 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-203ENST00000361654 MAN2A1Q16706 1144 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 FAM83BQ5T0W9 1011 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 BRINP3Q76B58 766 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 RNF10Q8N5U6 811 aaKnown RBP11.8□□□□□ -0.52
CLIP1-203ENST00000361654 LRRC8CQ8TDW0 803 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 P2RX5Q93086 422 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 DPH5Q9H2P9 285 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 EMILIN3Q9NT22 766 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 SCINQ9Y6U3 715 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 MEIS1O00470 390 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 ALDH1A1P00352 501 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 SREBF2Q12772 1141 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 SLC12A1Q13621 1099 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 SCARA5Q6ZMJ2 495 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 NEK9Q8TD19 979 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 ZC3H15Q8WU90 426 aaKnown RBP11.8□□□□□ -0.52
CLIP1-203ENST00000361654 AFG1LQ8WV93 481 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 MAGOHBQ96A72 148 aaKnown RBP11.8□□□□□ -0.52
CLIP1-203ENST00000361654 ASIC4Q96FT7 647 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 USP28Q96RU2 1077 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 RAVER2Q9HCJ3 691 aaKnown RBP11.8□□□□□ -0.52
CLIP1-203ENST00000361654 ZNF302Q9NR11 478 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 ESRRBO95718 433 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 PLA2G4BP0C869 781 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 ZNF853P0CG23 659 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 RALAP11233 206 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 LCORLQ8N3X6 602 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 CDC26Q8NHZ8 85 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 IFT43Q96FT9 208 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 KATNAL1Q9BW62 490 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 UBE2TQ9NPD8 197 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-203ENST00000361654 AATKQ6ZMQ8 1374 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 ZBED1O96006 694 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 HOXA13P31271 388 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-203ENST00000361654 DDIT3P35638 169 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 ZNF568Q3ZCX4 644 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 ACBD5Q5T8D3 534 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-203ENST00000361654 SPOPLQ6IQ16 392 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 PCGF5Q86SE9 256 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 PDZD8Q8NEN9 1154 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 DYNLL2Q96FJ2 89 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 STAP1Q9ULZ2 295 aa11.8□□□□□ -0.52
CLIP1-203ENST00000361654 CLIC2O15247 247 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 PRPF3O43395 683 aaKnown RBP11.79□□□□□ -0.52
CLIP1-203ENST00000361654 APOEP02649 317 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 ACCSLQ4AC99 568 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 PGBD3Q8N328 593 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 XPO4Q9C0E2 1151 aaKnown RBP11.79□□□□□ -0.52
CLIP1-203ENST00000361654 STAT3P40763 770 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 COPB1P53618 953 aaKnown RBP11.79□□□□□ -0.52
CLIP1-203ENST00000361654 DBNLQ9UJU6 430 aaKnown RBP11.79□□□□□ -0.52
CLIP1-203ENST00000361654 ABCC4O15439 1325 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 PTPRTO14522 1441 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 PPP6R2O75170 966 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 ADKP55263 362 aaKnown RBP11.79□□□□□ -0.52
CLIP1-203ENST00000361654 ST8SIA6P61647 398 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 IL1RL1Q01638 556 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 ZBTB18Q99592 522 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 BRIP1Q9BX63 1249 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 EDEM3Q9BZQ6 932 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 JCADQ9P266 1359 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 LRRD1A4D1F6 860 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 MSH2P43246 934 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 PEX3P56589 373 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 PTH1RQ03431 593 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 TTC31Q49AM3 519 aaPredicted RBP11.79□□□□□ -0.52
CLIP1-203ENST00000361654 SGO2Q562F6 1265 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 EHD2Q9NZN4 543 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 SPATA31A3Q5VYP0 1347 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 IGSF1Q8N6C5 1336 aa11.79□□□□□ -0.52
CLIP1-203ENST00000361654 INPP5BP32019 993 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 GUCY2FP51841 1108 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 WASHC5Q12768 1159 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 RCSD1Q6JBY9 416 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 FRA10AC1Q70Z53 315 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms