RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CDC42BPBQ9Y5S2 1711 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 PPFIA1Q13136 1202 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 MTMR2Q13614 643 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 PLCB4Q15147 1175 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 ALX1Q15699 326 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 POTEDQ86YR6 584 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 MYRIPQ8NFW9 859 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 ENOX1Q8TC92 643 aaKnown RBP20.13■□□□□ 0.81
CLIP2-202ENST00000361545 FAM167AQ96KS9 214 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 ACAD9Q9H845 621 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 SCAF8Q9UPN6 1271 aaKnown RBP20.13■□□□□ 0.81
CLIP2-202ENST00000361545 ABCA6Q8N139 1617 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 ELF1P32519 619 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 NDST4Q9H3R1 872 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 GNAT1P11488 350 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 STX2P32856 288 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 ALCAMQ13740 583 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 STRIP1Q5VSL9 837 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 TWF2Q6IBS0 349 aaKnown RBP20.13■□□□□ 0.81
CLIP2-202ENST00000361545 SFR1Q86XK3 245 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 MAGOHBQ96A72 148 aaKnown RBP20.13■□□□□ 0.81
CLIP2-202ENST00000361545 RILPQ96NA2 401 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 THAP9Q9H5L6 903 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 CLDN3O15551 220 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 SLC4A1P02730 911 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 SNX1Q13596 522 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 PSMD6Q15008 389 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 SURF1Q15526 300 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 SLC35F6Q8N357 371 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 NEDD1Q8NHV4 660 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 FAM81BQ96LP2 452 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 ZNF302Q9NR11 478 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 MAGED2Q9UNF1 606 aaPredicted RBP20.13■□□□□ 0.81
CLIP2-202ENST00000361545 POTEB3A0JP26 581 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 POTECB2RU33 542 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 YWHAGP61981 247 aaKnown RBP eCLIP20.12■□□□□ 0.81
CLIP2-202ENST00000361545 SF3B3Q15393 1217 aaKnown RBP20.12■□□□□ 0.81
CLIP2-202ENST00000361545 MAPK6Q16659 721 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 ZNF394Q53GI3 561 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 POTEBQ6S5H4 581 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 CCDC13Q8IYE1 715 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 STAG2Q8N3U4 1231 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 CALN1Q9BXU9 219 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 GABBR1Q9UBS5 961 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 ANXA13P27216 316 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 KRT76Q01546 638 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 NEDD9Q14511 834 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 MCPH1Q8NEM0 835 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 ARHGEF37A1IGU5 675 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 TSTA3Q13630 321 aaPredicted RBP20.12■□□□□ 0.81
CLIP2-202ENST00000361545 RABL6Q3YEC7 729 aaPredicted RBP20.12■□□□□ 0.81
CLIP2-202ENST00000361545 PRAMEF18Q5VWM3 479 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 BBS5Q8N3I7 341 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 ABCA9Q8IUA7 1624 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 SLC16A4O15374 487 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 SCYL1Q96KG9 808 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 SLC12A6Q9UHW9 1150 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 POLIQ9UNA4 740 aa20.12■□□□□ 0.81
CLIP2-202ENST00000361545 PASKQ96RG2 1323 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 CROCC2H7BZ55 1655 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 SPATA24Q86W54 205 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 TSC1Q92574 1164 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 KRT1P04264 644 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 GUCY2DQ02846 1103 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 LRRC63Q05C16 580 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 PRPSAP1Q14558 356 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 C12orf60Q5U649 245 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 ARMCX2Q7L311 632 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 PLA2G12BQ9BX93 195 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 SPATA31A5Q5VU36 1347 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 SPATA31A7Q8IWB4 1347 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 EIF4A3P38919 411 aaKnown RBP20.11■□□□□ 0.81
CLIP2-202ENST00000361545 CCDC62Q6P9F0 684 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 BARHL2Q9NY43 387 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 STK36Q9NRP7 1315 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 ARL4AP40617 200 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 RHPN2Q8IUC4 686 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 SPTLC3Q9NUV7 552 aa20.11■□□□□ 0.81
CLIP2-202ENST00000361545 RESP18Q5W5W9 173 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 SPATA33Q96N06 139 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 CPSF3Q9UKF6 684 aaKnown RBP20.1■□□□□ 0.81
CLIP2-202ENST00000361545 RNF139Q8WU17 664 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 FAM20AQ96MK3 541 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 IFT122Q9HBG6 1241 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 TYW1Q9NV66 732 aaKnown RBP20.1■□□□□ 0.81
CLIP2-202ENST00000361545 PPP1R18Q6NYC8 613 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 LDHDQ86WU2 507 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 ACRBPQ8NEB7 543 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 MCUR1Q96AQ8 359 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 OSBPL5Q9H0X9 879 aaPredicted RBP20.1■□□□□ 0.81
CLIP2-202ENST00000361545 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.1■□□□□ 0.81
CLIP2-202ENST00000361545 MKRN1Q9UHC7 482 aaKnown RBP20.1■□□□□ 0.81
CLIP2-202ENST00000361545 PYCARDQ9ULZ3 195 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 FNDC3AQ9Y2H6 1198 aaKnown RBP20.1■□□□□ 0.81
CLIP2-202ENST00000361545 SUGT1Q9Y2Z0 365 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 POTEFA5A3E0 1075 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 FTCDO95954 541 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 POTEIP0CG38 1075 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 ACTN1P12814 892 aa20.1■□□□□ 0.81
CLIP2-202ENST00000361545 POTEGQ6S5H5 508 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms