RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TGS1Q96RS0 853 aaKnown RBP9.97□□□□□ -0.81
VPS13A-203ENST00000360280 MKL2Q9ULH7 1088 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 IKBKBO14920 756 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 TBC1D22AQ8WUA7 517 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 SEPT3Q9UH03 358 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 NPATQ14207 1427 aa9.97□□□□□ -0.81
VPS13A-203ENST00000360280 ABCA10Q8WWZ4 1543 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 MKRN3Q13064 507 aaKnown RBP9.96□□□□□ -0.81
VPS13A-203ENST00000360280 TNFAIP1Q13829 316 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 TAB3Q8N5C8 712 aaPredicted RBP9.96□□□□□ -0.81
VPS13A-203ENST00000360280 DCAF5Q96JK2 942 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 UFL1O94874 794 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 KRT14P02533 472 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 KRT7P08729 469 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 FAM26FQ5R3K3 315 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 B4GALNT2Q8NHY0 566 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 THAP11Q96EK4 314 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 FSD1LQ9BXM9 530 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 BATF3Q9NR55 127 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 CAB39Q9Y376 341 aaPredicted RBP9.96□□□□□ -0.81
VPS13A-203ENST00000360280 VCAM1P19320 739 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 ODR4Q5SWX8 454 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 RHOT2Q8IXI1 618 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 CHURC1Q8WUH1 139 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 MRGBPQ9NV56 204 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 LZTS1Q9Y250 596 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 BRD1O95696 1058 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 COPS2P61201 443 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 KRR1Q13601 381 aaKnown RBP9.96□□□□□ -0.81
VPS13A-203ENST00000360280 MAN2A1Q16706 1144 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 RYBPQ8N488 228 aaPredicted RBP9.96□□□□□ -0.81
VPS13A-203ENST00000360280 SPATA5Q8NB90 893 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 SYMPKQ92797 1274 aaKnown RBP9.96□□□□□ -0.81
VPS13A-203ENST00000360280 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.81
VPS13A-203ENST00000360280 SEL1LQ9UBV2 794 aa9.96□□□□□ -0.81
VPS13A-203ENST00000360280 NDUFA8P51970 172 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 RUNX1T1Q06455 604 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 CEP78Q5JTW2 689 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 TUBGCP3Q96CW5 907 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 C19orf60Q96EN9 201 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 SNX25Q9H3E2 840 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 ASCC2Q9H1I8 757 aaPredicted RBP9.96□□□□□ -0.82
VPS13A-203ENST00000360280 RWDD2AQ9UIY3 292 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 PIK3R2O00459 728 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 RAPGEF3O95398 923 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 ZYXQ15942 572 aaKnown RBP9.96□□□□□ -0.82
VPS13A-203ENST00000360280 PARP9Q8IXQ6 854 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 GRAMD1AQ96CP6 724 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 FAM227BQ96M60 508 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 NOVA2Q9UNW9 492 aaKnown RBP9.96□□□□□ -0.82
VPS13A-203ENST00000360280 NFATC2IPQ8NCF5 419 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 SLC26A7Q8TE54 656 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 ARHGEF1Q92888 912 aaKnown RBP9.96□□□□□ -0.82
VPS13A-203ENST00000360280 ADA2Q9NZK5 511 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 EHD2Q9NZN4 543 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 ZNF532Q9HCE3 1301 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 ACSL3O95573 720 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 ST13P50502 369 aaKnown RBP9.96□□□□□ -0.82
VPS13A-203ENST00000360280 CCDC127Q96BQ5 260 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 MLXIPQ9HAP2 919 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 JAG2Q9Y219 1238 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 SERPING1P05155 500 aa9.96□□□□□ -0.82
VPS13A-203ENST00000360280 NHEJ1Q9H9Q4 299 aaPredicted RBP9.96□□□□□ -0.82
VPS13A-203ENST00000360280 MRPL11Q9Y3B7 192 aaKnown RBP9.95□□□□□ -0.82
VPS13A-203ENST00000360280 TOPBP1Q92547 1522 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 MOCS3O95396 460 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 SERPINB4P48594 390 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 DMC1Q14565 340 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 FAM173BQ6P4H8 233 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 MAGEB5Q9BZ81 275 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 GCOM2Q9BZD3 368 aaPredicted RBP9.95□□□□□ -0.82
VPS13A-203ENST00000360280 C16orf96A6NNT2 1141 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 CCDC22O60826 627 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 NSMFQ6X4W1 530 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 NCAPG2Q86XI2 1143 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 PLD3Q8IV08 490 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 GID8Q9NWU2 228 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 SLC4A1P02730 911 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 DDB1Q16531 1140 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 KLHL38Q2WGJ6 581 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 HABP4Q5JVS0 413 aaKnown RBP9.95□□□□□ -0.82
VPS13A-203ENST00000360280 TLK2Q86UE8 772 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 MMTAG2Q9BU76 263 aaKnown RBP9.95□□□□□ -0.82
VPS13A-203ENST00000360280 SLC39A2Q9NP94 309 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 WDR91A4D1P6 747 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 IMPDH2P12268 514 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 RBL2Q08999 1139 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 GINS4Q9BRT9 223 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 GOLGA8MH3BSY2 632 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 CCDC142Q17RM4 750 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 PBXIP1Q96AQ6 731 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 METTL22Q9BUU2 404 aaPredicted RBP9.95□□□□□ -0.82
VPS13A-203ENST00000360280 DYNLT1P63172 113 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 TRIM71Q2Q1W2 868 aaKnown RBP9.95□□□□□ -0.82
VPS13A-203ENST00000360280 PPP4R3CPQ6ZMV5 832 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 IL10P22301 178 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 TRAPPC10P48553 1259 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 TERF2Q15554 542 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 ME3Q16798 604 aa9.95□□□□□ -0.82
VPS13A-203ENST00000360280 RUBCNQ92622 972 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms