RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SERPING1P05155 500 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 FBXO18Q8NFZ0 1043 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 APOL6Q9BWW8 343 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 CDC23Q9UJX2 597 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 PLEKHG1Q9ULL1 1385 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 TBXAS1P24557 533 aaPredicted RBP10.4□□□□□ -0.75
CUX1-203ENST00000360264 C6orf118Q5T5N4 469 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 ARL6IP4Q66PJ3 421 aaKnown RBP10.4□□□□□ -0.75
CUX1-203ENST00000360264 TTC13Q8NBP0 860 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 CCNYQ8ND76 341 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 KDM5DQ9BY66 1539 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 ABCC4O15439 1325 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 GRIN1Q05586 938 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 SCOCQ9UIL1 159 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 ITM2BQ9Y287 266 aa10.4□□□□□ -0.75
CUX1-203ENST00000360264 MT-ND3P03897 115 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 MCF2P10911 925 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 OLFML3Q9NRN5 406 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 PNMA6FA0A0J9YX94 578 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 H3BRJ5 948 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 SORBS3O60504 671 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 PSMA2P25787 234 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 TRIM59Q8IWR1 403 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 ADAMTS12P58397 1594 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 DHX9Q08211 1270 aaKnown RBP10.39□□□□□ -0.75
CUX1-203ENST00000360264 CEP19Q96LK0 163 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 UIMC1Q96RL1 719 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 KIF2CQ99661 725 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 SYNGAP1Q96PV0 1343 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 RASSF7Q02833 373 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 STX19Q8N4C7 294 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 FMO2Q99518 471 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 NUP153P49790 1475 aaKnown RBP10.39□□□□□ -0.75
CUX1-203ENST00000360264 TFAMQ00059 246 aaKnown RBP10.39□□□□□ -0.75
CUX1-203ENST00000360264 KLHDC4Q8TBB5 520 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 UBE2Q2Q8WVN8 375 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 USP28Q96RU2 1077 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 SYCE1LA8MT33 242 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 FOXP4Q8IVH2 680 aaPredicted RBP10.39□□□□□ -0.75
CUX1-203ENST00000360264 BCAS4Q8TDM0 211 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 PCDHB8Q9UN66 801 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 BRWD1Q9NSI6 2320 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 TOM1L1O75674 476 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 FGAP02671 866 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 AP3B2Q13367 1082 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 FLOT2Q14254 428 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 OPTNQ96CV9 577 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 ACAP3Q96P50 834 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 KIAA1586Q9HCI6 787 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 KRT24Q2M2I5 525 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 P2RX5Q93086 422 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 MYO1DO94832 1006 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 SKIP12755 728 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 JAK3P52333 1124 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 FBXW4P57775 412 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 STX18Q9P2W9 335 aaKnown RBP10.39□□□□□ -0.75
CUX1-203ENST00000360264 HNRNPRO43390 633 aaKnown RBP10.39□□□□□ -0.75
CUX1-203ENST00000360264 ATP5HO75947 161 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 KRT38O76015 456 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 BASP1P80723 227 aaKnown RBP10.39□□□□□ -0.75
CUX1-203ENST00000360264 SLC10A5Q5PT55 438 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 CAPN12Q6ZSI9 719 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 LRRC43Q8N309 656 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 ABCC2Q92887 1545 aa10.39□□□□□ -0.75
CUX1-203ENST00000360264 SPARCL1Q14515 664 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 G2E3Q7L622 706 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 SCYL3Q8IZE3 742 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 UBE2TQ9NPD8 197 aaPredicted RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 KIAA0825Q8IV33 1275 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 FAF2Q96CS3 445 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 HSPA2P54652 639 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 ABT1Q9ULW3 272 aaKnown RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 MYH11P35749 1972 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 FMNL1O95466 1100 aaPredicted RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 OCM2P0CE71 109 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 OCMP0CE72 109 aaPredicted RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 ZBTB33Q86T24 672 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 ZBED2Q9BTP6 218 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 KIF17Q9P2E2 1029 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 MEIS1O00470 390 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 ASAP2O43150 1006 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 IFT88Q13099 833 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 EPAS1Q99814 870 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 TCOF1Q13428 1488 aaKnown RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 CYP4A11Q02928 519 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 CNOT6LQ96LI5 555 aaKnown RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 MMTAG2Q9BU76 263 aaKnown RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 KLC2Q9H0B6 622 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 SNX2O60749 519 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 GCKP35557 465 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 TCHHQ07283 1943 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 PFDN1O60925 122 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 LDHAP00338 332 aaKnown RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 COPS2P61201 443 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 TBC1D9BQ66K14 1250 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 TTC19Q6DKK2 380 aaPredicted RBP10.38□□□□□ -0.75
CUX1-203ENST00000360264 LRRC8AQ8IWT6 810 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 GUCY2DQ02846 1103 aa10.38□□□□□ -0.75
CUX1-203ENST00000360264 TSSK1BQ9BXA7 367 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms